Alteromonas mediterranea U4: I607_06765
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Entry
I607_06765 CDS
T02720
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal00220
Arginine biosynthesis
amal00240
Pyrimidine metabolism
amal00250
Alanine, aspartate and glutamate metabolism
amal01100
Metabolic pathways
amal01110
Biosynthesis of secondary metabolites
amal01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
I607_06765 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
I607_06765 (carB)
00220 Arginine biosynthesis
I607_06765 (carB)
Enzymes [BR:
amal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
I607_06765 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AGP85153
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Position
1510321..1513542
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AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALELDKHGVLEEFGCELIGATA
DAIDKAENRERFDQAMKNIGLECPRAEIAHSMDEAHDVLSRIGFPCIIRPSFTMGGTGGG
IAYNIDEFNEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKANNCIIVCTIENFDPM
GVHTGDSITVAPAQTLTDKEFQIMRNAAMAVLREIGVETGGSNVQFGVDPKTGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELANDITGGLTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGASGLNPMVDLEDPES
RNKVVYELRQPGAERIWYIGDAFRMGMSVEEVFNLTNIDRWYLVQLEDLILLEAKVAELG
LPGIDADFMRALKRKGFSDARLAELTKVAESDIREARRGFGISPVYKRVDTCAAEFSTST
AYMYSTYDEECEAAPTDKEKIMVLGGGPNRIGQGIEFDYCCVHAALSMREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVAKEQPKGVIVQYGGQTPLKLARALEAAGVPV
IGTSPEAIDRAEDRERFQQMVNKLNLKQPANATVTNVEQALTMAEEIGFPLVVRPSYVLG
GRAMEIVYDIKDLKRYLNEAVKVSNDAPVLLDRFLDDAIEVDIDAICDGKEVVIGGIMEH
IEQAGVHSGDSACSLPPHSLPKDIQDVMREQVKAMALELGVVGLMNTQFAIKDGEVYLIE
VNPRAARTVPFVSKATGIPLAKVAARAMAGVSLAEQGVTEEVIPPFYSVKEVVLPFAKFQ
GVDPLLGPEMRSTGEVMGVGDTFEEAYAKANLGAGAPLPKEGKALISVRETDKPKIIELA
KALVAAGFSIEATRGTATTLYDAGIMSTVVNKLSEGRPNIVDAIKNGEYAYLINTTEGRQ
AITDSVYIRREALVNKVTYTTTMNAAFATIRAKSADDRNKVASVQELHARLKH
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtaccgacataaaaagtattcttatcattggtgctggccctattgtaatc
ggccaggcttgtgaattcgactattcaggcgcgcaagcgtgtaaagcccttcgcgaagaa
ggctaccgtgttattttggttaactctaacccagcaaccattatgaccgacccagaaatg
gcagatgcgacttacatcgagcctattcactgggaagtagtacgcaaaattatcgaaaaa
gaacgtccagacgccattcttcctactatgggtgggcaaacagcccttaactgtgcgcta
gagcttgataagcacggtgtactagaagaatttggctgtgagcttattggcgcaacggct
gacgctatcgataaggcggaaaaccgcgaacgctttgaccaagcgatgaaaaacattggc
cttgagtgtccacgtgcggaaatcgcccacagtatggacgaagcgcacgatgtgctaagt
cgcatcggcttcccatgtatcattcgtccttcattcactatgggcggaaccggcggtggt
attgcctacaacattgatgagttcaatgaaatttgtacccgcggcctcgacctttccccc
accaacgaacttcttattgatgagtcgttacttggttggaaagaatacgagatggaagta
gtacgcgataaggcaaataactgcattattgtttgtacaattgaaaacttcgatccaatg
ggggttcataccggcgactctatcactgttgccccagcgcaaacccttaccgacaaagaa
ttccagattatgcgtaatgcagcgatggctgtactacgtgaaattggtgttgaaaccggt
ggttcaaacgtacagtttggcgtagaccctaaaaccggtcgtatggttatcatcgaaatg
aacccgcgtgtatcgcgttcatcggcgctagcctctaaagcaacaggcttcccgattgcg
aaagtggctgcgaagttagcagtaggttacaccctagatgagctagctaacgacatcact
ggcggtttaacgccggcgtcgtttgaaccgtcaatcgattacgttgtcactaagatccct
cgcttcaactttgaaaagtttgccggtgctaacgaccgtctcaccacacagatgaagtca
gtgggcgaggtgatggcgattggtcgtaaccaacaagagtcgttacaaaaagcccttcgt
ggtcttgaagttggtgcgtcaggtttgaacccaatggttgaccttgaagaccctgagtcg
cgcaataaagtcgtttacgaacttcgccagccgggtgcagagcgtatttggtacattggc
gatgcattccgtatgggcatgagcgttgaagaagtgttcaaccttaccaatattgatcgc
tggtatttagtgcagctagaagatcttattcttcttgaagcgaaagtggcagaacttggt
ttgccgggcattgatgctgactttatgcgtgcgcttaagcgcaaaggtttctcagatgcg
cgccttgctgaactgactaaggtagcagagagcgatattcgtgaagctcgtcgcggtttt
ggtatttctccagtgtacaagcgcgtagatacgtgtgccgcagagttctctaccagcacg
gcttatatgtactcgacctatgacgaagagtgtgaagctgcgccaaccgataaagaaaaa
atcatggtattgggcggtggccctaaccgtatcggtcaaggcattgaattcgattattgc
tgcgttcacgcggcgctttcaatgcgtgaagacggttacgagaccattatggttaactgt
aaccctgaaacggtgtctactgactacgacacgtcagatcgcttgtatttcgaaccagta
acgctggaagatgtgcttgaaatcgttgctaaagagcagccaaaaggcgttatcgtacag
tacggtggtcaaacgccacttaaacttgctcgtgccctagaagcagctggcgtaccggta
atcggtacctcaccagaagcgattgaccgtgctgaagaccgtgagcgtttccagcaaatg
gtgaacaagcttaatcttaagcagcctgcgaatgcgacagtaactaacgtcgagcaagcg
ctaactatggctgaagagattggcttcccgctggttgttcgtccaagctacgtgttaggt
ggacgtgcgatggaaatcgtttacgacattaaagaccttaagcgttatctaaacgaagcg
gttaaagtgtctaacgacgcgcccgtattgctagaccgtttcctagatgacgctatcgaa
gtggatatcgatgctatatgcgacggtaaagaggttgtgattggcggtatcatggaacac
atcgaacaagcgggtgttcactctggtgactctgcatgttcactgcctccgcattcacta
cccaaagacatccaggacgtgatgcgcgagcaggtaaaagccatggcgctagagcttggc
gtagtggggctaatgaatacccagtttgcgataaaagacggcgaagtttacctaatcgag
gttaaccctcgtgcagcgcgtacggtaccgttcgtatcaaaagccacgggcattcctctt
gctaaagttgcggcacgtgcaatggcgggcgtaagcttggcagagcagggcgtaactgaa
gaagtgatcccacctttctactcggtgaaagaagtggtacttccgtttgctaagttccaa
ggtgttgacccactgttaggcccagaaatgcgctcaactggtgaagttatgggtgttggc
gatacgtttgaagaagcgtacgctaaagcgaaccttggcgcaggcgcgccactgccgaaa
gaaggtaaagcacttatctctgtgcgtgaaactgacaagccgaaaattatcgagctagct
aaggcccttgttgcggctgggttcagtatcgaagccacgcgcggtacagcaacgaccttg
tacgatgcaggtataatgagcacggtggtgaataagctatctgaaggccgacccaacatt
gttgatgctatcaaaaacggtgaatacgcttatttgataaatacaacagaaggtcgccaa
gcgattaccgattcagtttacatacgtcgtgaagccttggtgaacaaggttacctatacc
accacgatgaatgcagcgtttgcaactattcgcgctaagtctgctgatgaccgcaataaa
gtggcttcagttcaagaactgcacgctaggcttaaacactga
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