Alteromonas mediterranea U4: I607_06830
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Entry
I607_06830 CDS
T02720
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amal03016
]
I607_06830
Enzymes [BR:
amal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
I607_06830
Transfer RNA biogenesis [BR:
amal03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
I607_06830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AGP85166
LinkDB
All DBs
Position
complement(1524871..1526304)
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AA seq
477 aa
AA seq
DB search
MTKKLYIKTWGCQMNEYDSEKMADLLDSTHGFSAAQSAEEADVILLNTCSIREKAQEKVF
HQLGRWKTLKQDKPELIIGVGGCVASQEGDTIRQRAPFVDLVFGPQTLHRLPEMINELKG
GAKSVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTFCVVPYTRGEEVSRPVDD
VLLEIAQLAGQGVREVNLLGQNVNAYRGENYDGTICRFSELLELVAAIDGIDRIRYTTSH
PVEFTDDIIDAYASIPELVDHLHLPVQSGSDRILNLMKRGHTALEYKSKMRKLKKIRPNI
SLSSDFIIGFPGETDADFEATMDLIQAVDYDLSFSFIYSARPGTPAADAVDDVTEETKKQ
RLHLLQQRITQQALRIARHMVGTEQRILVEGPSKKNPMELSGRTENNRVVNFEGTPDMIG
EFVDVNITDVFTNSLRGEVVRRESEMGLRVAVSPQSIMAKHQADMPDELGVGQFSPA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaagctgtatatcaaaacctggggctgccaaatgaacgagtacgactcggag
aaaatggcagacttactagactcaacacacggctttagcgctgcacaaagtgctgaagaa
gccgacgttattttgcttaacacctgctctatccgcgaaaaagcgcaggaaaaagtgttt
catcaacttggccgttggaaaaccctcaagcaagataagccagaacttattattggtgta
ggtggctgtgtagcctcacaagaaggcgacactattcgtcagcgcgcgccattcgtagac
ttggttttcggcccgcaaacactacaccgcttgcctgaaatgattaacgaacttaaaggc
ggcgcaaagtcagtgattgacgtgagtttccctgaaattgaaaagtttgatcgcctgcct
gagccgcgcgctgagggcccaaccgcgttcgtttccattatggaaggctgttcaaaatac
tgtacattctgcgtagtaccttacacccgtggtgaagaagtaagccgccctgttgatgac
gtattgcttgaaattgcacagcttgctggccaaggcgtacgtgaagtaaaccttcttggt
caaaacgtaaatgcataccgcggtgaaaactacgacggtacgatttgtcgtttctctgag
ttacttgaactcgttgcagctatcgacggtatcgaccgcattcgctacaccacgtcgcac
ccggttgaattcaccgacgacatcatagatgcgtacgcctcaattccagagcttgttgac
caccttcacctaccggttcaaagtggctcagaccgcatattgaaccttatgaagcgcggt
catacggcattagaatacaaatctaaaatgcgtaagctgaaaaagattcgcccgaacatt
agtttgtcgagcgactttatcattgggttccctggtgaaaccgatgctgactttgaagcc
accatggatttgattcaggccgttgattacgatcttagcttcagcttcatttatagtgcc
cgccctggtacaccagcggctgatgctgtcgacgatgtaacggaagagaccaaaaagcag
cgtcttcaccttctacagcagcgtattacgcaacaagcattgcgcattgctcgtcacatg
gtaggtacagagcagcgtattctggttgaaggtccgtcaaagaaaaacccaatggagctt
tctggacgtactgaaaataaccgggtggtaaactttgaaggcacacctgacatgattggc
gaattcgttgatgtaaacatcaccgacgtgtttaccaactcactacgtggtgaagttgtg
cgcagagagagtgagatgggcttgcgtgttgccgtttcgccccaatctattatggcaaag
catcaggcagatatgcccgatgagcttggcgtgggtcaatttagcccagcctaa
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