Alteromonas mediterranea U4: I607_06985
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Entry
I607_06985 CDS
T02720
Name
(GenBank) DNA-binding transcriptional activator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amal03000
]
I607_06985
Transcription factors [BR:
amal03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I607_06985
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AGP85197
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Position
1553515..1554417
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AA seq
300 aa
AA seq
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MHRRLPPLNALKAFEAAARHLSFTKAADELFVTQAAVSHQIKALEDFLSMKLFLRRNRTL
LLTEEGQAYFLELKDIFKNLQDATERLLAKGSKGAITVAMPPSFASQWLVPRIHKFSLAH
PDIDVRIKAVDFDEGFLEDDVDVAIYYGKGRWAGLQADQLHKEFLTPLCSPLLFQGPKPL
SSLSDLRHHVLLHDLSRTAWKNWLKHVGVVGVNVNQGPVFSHSMLVLQAAALGQGIALGN
TVLARPEIEAGRLVMPFEERVESRDAFYLVCEESQAELGKIAAFRDWILALVEAEQEDLL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgacgtttaccccctctaaacgctttgaaagcatttgaagcagcggcccgccat
ttgagctttaccaaagcggcagatgagctgtttgttacgcaagctgccgtaagtcatcag
ataaaggcacttgaagattttttatcgatgaagctgtttttgcgacgcaatagaacgctg
ctattaactgaagaggggcaggcgtactttttagaactcaaagacatctttaaaaacttg
caagacgctaccgaaaggctacttgctaaaggaagtaagggcgccattactgttgctatg
ccaccgagctttgcaagccaatggctggtgccgcgcattcacaagtttagtttggcgcac
ccagatattgacgttcgtataaaagccgtcgactttgacgagggctttttggaagatgac
gtagacgtggcgatatactacggcaaggggcgctgggctgggcttcaagccgaccagctg
cacaaggaatttctaacgccgctatgctcaccattgctttttcaaggccctaagccgttg
tcgagcttgtctgatttacgccatcacgtattgcttcacgacttaagccgcacggcttgg
aaaaattggttgaagcacgtgggcgtggttggcgttaatgtgaaccaaggcccagttttc
agccactcaatgctggtattgcaagctgccgcactaggtcaaggcattgcgttagggaat
acggttttagcaaggccagaaattgaagcaggtcgcctagtcatgccgtttgaagaaaga
gtagagagtcgagatgcattctatttagtgtgcgaagaatcacaagctgagctgggtaag
attgcggcattcagagactggatcttagcgttggtggaagcagaacaagaggacctgttg
taa
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