Alteromonas mediterranea U4: I607_09575
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Entry
I607_09575 CDS
T02720
Name
(GenBank) transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amal03000
]
I607_09575
Transcription factors [BR:
amal03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I607_09575
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AGP85710
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Position
2135291..2136175
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AA seq
294 aa
AA seq
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MDVSYRQVKAFVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFKRNTRNVSLT
PEGEVLFPNALRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPSILSAFHKRTP
NVNLRIVDVVMEQVIHEVTTGRSEIGFSFEPERKDGLVFKSLFADQFVVVANSSQAKYLS
NAPSWQDCLLHPLVMMNRGSAVRHWTQSQLARFGELNIIAETGQLSTLGKLIQNGLGISI
MPAICQSQMEGLGLVVRQITINPLIKNIGIIKHARKGLSLPAQSMWDLAIAHYA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtatcctaccgacaagtgaaagcgtttgtagaagtggcgaaatcttcgacattt
gctgaagctgcagttaatttacaccttactcagccagcactgtcttctgccattaagaaa
atggaagagcaattgggcggcaaactctttaagcgtaatacgcgtaatgtaagcctgaca
ccggaaggtgaagtgttattcccaaatgccttacgactgcttcacgattgggataacacg
ttttcagacatacagaacttgtttgccatggccaaaggtcagctgaccatttgcgcaatg
ccctcatttgcagagtcacatttacccagtattctatctgcttttcacaagagaacgcca
aacgtcaacttgcgtatcgtcgatgtagtgatggagcaagttattcacgaagtcactaca
ggtcgaagtgaaatagggttttccttcgagccagagcgaaaagatgggctagtgtttaaa
agtctgtttgctgaccagtttgttgtagtggctaattcttctcaggccaagtatttaagc
aacgcgccaagctggcaagactgcttgctgcaccctctggtaatgatgaacagaggctcc
gcggttcggcattggacacaatctcaattagcgcgttttggtgaattgaacattattgcc
gaaacgggtcagctatcaacgcttggcaaattaattcaaaatgggttgggcatttcaatt
atgccggctatttgccaatctcaaatggaggggttagggctggtagtgagacaaataaca
atcaacccgttgataaaaaatatcggtattataaagcatgcgcgaaagggtttgtcgcta
cctgctcaatctatgtgggacttagctatcgcgcattacgcttaa
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