KEGG   Alteromonas mediterranea U4: I607_10020
Entry
I607_10020        CDS       T02720                                 
Name
(GenBank) deoxyribodipyrimidine photolyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
amal  Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:amal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amal03400]
    I607_10020
Enzymes [BR:amal01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     I607_10020
DNA repair and recombination proteins [BR:amal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    I607_10020
 Prokaryotic type
    I607_10020
SSDB
Motif
Pfam: DNA_photolyase NXPE4_C
Other DBs
NCBI-ProteinID: AGP85799
LinkDB
Position
complement(2245282..2246268)
AA seq 328 aa
MLSDNTKPPITIIWLKRDLRLRDHEPLFRAVASNERILLLYCWEPSLIEEPHMSVRHWHF
IQQSIDDINGQLPEHVNVLTLHMEAVDALAFISRFYTINAVRSYQEIGLKVTYNRDLRVA
NHLNNRRIPFLEAKCGAVIRGLPHRAQWKANWEEYFAESTYDYDLKRANWVKWNVHVDIQ
KASLTLSEVSALYAAKKYINKDYLSKYCGVLSEDGLIDFSAMQPGGERRAWQVLKDFFND
RGQYYHQHISKPEYARRACSRLSPYLAWGNISIKQVYQSVQRQKHKKRALPIHEKKRWSR
ALSALTSRLHWHCHFMDPRGHLNENLRF
NT seq 987 nt   +upstreamnt  +downstreamnt
atgttgagcgacaacactaaaccgcctattacaataatatggttaaagcgagatcttcgc
ttgcgagaccatgaacccctttttcgtgctgtcgcatctaatgaacgtattctcttactt
tattgctgggaaccgtcattaatagaagaaccgcacatgagcgtgcgtcactggcacttt
attcagcaaagtatcgacgatataaatggtcaactgccagaacatgtcaacgtactaacg
ctgcatatggaggccgttgatgccctagcctttatttcacggttttacacgattaacgcg
gttagaagttaccaggaaataggtttaaaggttacgtataaccgtgacttacgggtcgct
aaccatttgaataataggcgcatcccctttttggaagcaaaatgtggcgcggtaataaga
ggattgcctcatcgagcgcagtggaaagctaactgggaggagtattttgctgaaagcacc
tatgattacgacctaaagcgtgcaaattgggttaaatggaatgtgcatgttgatatacaa
aaagcgtcgctaacactgagtgaggtttccgctttatatgcggcaaaaaaatatataaat
aaggattacctgtcaaaatactgtggcgttttatccgaagacggccttatagattttagc
gcaatgcagcccggtggcgaacggcgagcgtggcaagtacttaaggacttttttaatgat
cgcggtcagtactatcaccaacacatttctaagcccgagtacgcaaggcgtgcttgttct
cgtttgagcccataccttgcttggggcaatatctcgattaagcaagtgtatcaaagtgta
cagcgccaaaaacataagaaacgagcgttgccaatacacgagaaaaagcgctggagccgt
gccctgtccgcgttaacatcaaggttacactggcattgccactttatggacccgcggggg
catttgaacgagaacctacggttttga

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