Alteromonas mediterranea U4: I607_10020
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Entry
I607_10020 CDS
T02720
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_10020
Enzymes [BR:
amal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
I607_10020
DNA repair and recombination proteins [BR:
amal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
I607_10020
Prokaryotic type
I607_10020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
NXPE4_C
Motif
Other DBs
NCBI-ProteinID:
AGP85799
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All DBs
Position
complement(2245282..2246268)
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AA seq
328 aa
AA seq
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MLSDNTKPPITIIWLKRDLRLRDHEPLFRAVASNERILLLYCWEPSLIEEPHMSVRHWHF
IQQSIDDINGQLPEHVNVLTLHMEAVDALAFISRFYTINAVRSYQEIGLKVTYNRDLRVA
NHLNNRRIPFLEAKCGAVIRGLPHRAQWKANWEEYFAESTYDYDLKRANWVKWNVHVDIQ
KASLTLSEVSALYAAKKYINKDYLSKYCGVLSEDGLIDFSAMQPGGERRAWQVLKDFFND
RGQYYHQHISKPEYARRACSRLSPYLAWGNISIKQVYQSVQRQKHKKRALPIHEKKRWSR
ALSALTSRLHWHCHFMDPRGHLNENLRF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcgacaacactaaaccgcctattacaataatatggttaaagcgagatcttcgc
ttgcgagaccatgaacccctttttcgtgctgtcgcatctaatgaacgtattctcttactt
tattgctgggaaccgtcattaatagaagaaccgcacatgagcgtgcgtcactggcacttt
attcagcaaagtatcgacgatataaatggtcaactgccagaacatgtcaacgtactaacg
ctgcatatggaggccgttgatgccctagcctttatttcacggttttacacgattaacgcg
gttagaagttaccaggaaataggtttaaaggttacgtataaccgtgacttacgggtcgct
aaccatttgaataataggcgcatcccctttttggaagcaaaatgtggcgcggtaataaga
ggattgcctcatcgagcgcagtggaaagctaactgggaggagtattttgctgaaagcacc
tatgattacgacctaaagcgtgcaaattgggttaaatggaatgtgcatgttgatatacaa
aaagcgtcgctaacactgagtgaggtttccgctttatatgcggcaaaaaaatatataaat
aaggattacctgtcaaaatactgtggcgttttatccgaagacggccttatagattttagc
gcaatgcagcccggtggcgaacggcgagcgtggcaagtacttaaggacttttttaatgat
cgcggtcagtactatcaccaacacatttctaagcccgagtacgcaaggcgtgcttgttct
cgtttgagcccataccttgcttggggcaatatctcgattaagcaagtgtatcaaagtgta
cagcgccaaaaacataagaaacgagcgttgccaatacacgagaaaaagcgctggagccgt
gccctgtccgcgttaacatcaaggttacactggcattgccactttatggacccgcggggg
catttgaacgagaacctacggttttga
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integrated database retrieval system