Alteromonas mediterranea U4: I607_10040
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Entry
I607_10040 CDS
T02720
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_10040
Enzymes [BR:
amal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
I607_10040
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
I607_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AGP85803
LinkDB
All DBs
Position
2249139..2250677
Genome browser
AA seq
512 aa
AA seq
DB search
MAALILVLGDQLTDSLPVIAGAVKSKDTILMAEVREEATYVKHHKKKIAFLFSAMRHFAA
HLRDNNYQVNYVHYTDEGNQGDLLAQVKHTLSRQHFDEVKVTVPGEYRLLKSMQQWQNQL
GIPVTICEDNRFFSTPNEFSEWADGKKQLRMEFFYREMRRKHNVLMDGKNPIGGKWNYDA
QNRESMPETQKVPKHTTFAIDDITSDVIELVKSEFSEHFGDIDNFHFAVTRKDALSVLNT
FIEERLPNFGQYQDAMVEGKPWLYHSHIAFYLNCGLLTPKEAIQAAEQAYHAGQVPLNSA
EGFIRQILGWREYVRGFYWHFMPNLKTDNYFDNSRALPSFFWDAQTNMNCMRQCIKETQQ
NTYAHHIQRLMVIGNFSLLTELSPEEVQAWYLLVYADAYEWVELPNVAGMILYSDGGNLA
SKPYVASGSYINKMSNYCKNCGYQVSKKTGPKACPFNYLYWHFIDKHKEKLSNNHRMAMI
YKTYGRMKEENIETMKQDAAIFLTKLTNDEEV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacttattttagtcctaggtgaccagctcaccgactcattaccagtaatagcg
ggcgccgtaaaaagcaaagacaccattcttatggcagaagtgcgggaagaagctacctat
gtaaagcatcataaaaagaagatcgctttcctgtttagtgccatgcgtcattttgctgca
catttgcgcgacaataactatcaggttaactacgtccactataccgatgaaggcaaccag
ggtgatttacttgcacaagtaaagcatacgttaagtcggcagcactttgatgaagttaag
gtaactgtgcctggggaatatcggctgcttaaaagcatgcagcagtggcaaaatcaacta
ggtatacccgttactatttgcgaagataatcgctttttctctacccccaatgaatttagt
gaatgggccgatggaaaaaagcagcttcgcatggagttcttttatcgggaaatgaggcgc
aagcacaatgtgttgatggatggcaaaaaccctattggggggaaatggaactatgacgcg
caaaatcgcgagtctatgcctgaaacccaaaaggtgccaaaacacaccacattcgctatt
gacgatattacttcagatgttatcgaattagtaaaaagtgaattcagcgaacattttggc
gatattgataattttcactttgcggtcacgcgaaaagatgcactcagcgttttgaacacc
ttcatcgaagagaggctaccaaatttcggtcagtatcaagacgctatggtcgagggaaag
ccttggctttatcattcacatatcgcgttctacttaaactgtggccttcttacaccgaaa
gaagccattcaagccgccgaacaagcctaccacgcagggcaagtgccgctaaattctgcg
gaagggtttatccgacaaattctgggatggcgcgagtatgttcgcggtttctattggcac
ttcatgcctaacttgaagaccgataattacttcgataatagtagagcgttaccttctttt
ttctgggatgcgcagaccaacatgaactgtatgcgtcagtgcattaaagagactcagcaa
aatacctatgctcatcatattcaacggctaatggtaataggcaatttcagcttgttaacc
gaactgagccctgaagaggtacaagcttggtatttgctggtttatgccgatgcttatgaa
tgggttgaactacccaatgtcgcgggaatgattttgtacagcgacggtggaaacttagca
agtaaaccctacgtcgctagcggtagctacattaataaaatgagcaattactgcaaaaac
tgtggctatcaggtgtcgaaaaagacagggcccaaggcttgccccttcaactacctatac
tggcatttcattgataaacacaaagaaaagcttagcaacaatcatcgtatggcaatgatt
tataagacctatgggcggatgaaagaagaaaatatagagactatgaagcaggatgcagca
atattcttaactaagcttaccaacgatgaagaagtctaa
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