Alteromonas mediterranea U4: I607_10405
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Entry
I607_10405 CDS
T02720
Name
(GenBank) seryl-tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
I607_10405
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amal01007
]
I607_10405
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amal03016
]
I607_10405
Enzymes [BR:
amal01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
I607_10405
Amino acid related enzymes [BR:
amal01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
I607_10405
Transfer RNA biogenesis [BR:
amal03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
I607_10405
Prokaryotic type
I607_10405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
APG6_N
Motif
Other DBs
NCBI-ProteinID:
AGP85870
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All DBs
Position
complement(2313801..2315096)
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AA seq
431 aa
AA seq
DB search
MLDPKCLRSDIEQTAKRLAARGFNLDVAAFSSLEEKRKTLQSRTQDLQNERNVRSKSIGK
AKAQGEDIAPLLAEVGKLGDELDAAKAELSELLEEINTLTQGIPNLPHESVPEGKDEDDN
VEISRWGEPRTFDFEVKDHVDVAEGLNNGLDFATASKLTGSRFVVMRGDIARLNRALAQF
MLDTHTQEHGYQEMYVPYLVNADSLYGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVP
LTNIARDEILDAKTLPVKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDS
FDALEALTGHAEVILQKLELPYRKVLLCTGDMGFGACKTYDLEVWLPAQNTYREISSCSN
MLDFQARRMQARFRNPETNKPELLHTLNGSGLAVGRTLVAILENNQQADGSVTVPKALVP
YMAGQEVIKAS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgttagatccaaagtgtttgcgaagcgatatagaacaaacagctaagcgattagctgcc
cgtggttttaacctcgacgtagcagctttcagttcgcttgaagaaaaaagaaaaacactt
cagtccagaacacaggatctgcaaaacgagcgtaatgtacgaagtaaatccattggtaag
gcaaaagcgcagggtgaagatattgcgccgcttttagctgaagtgggtaaacttggcgac
gagcttgatgccgctaaagcagagcttagcgaactgttagaagaaattaatacccttacg
caaggcattcctaatttgccgcatgagtcggtaccagaagggaaagacgaagacgacaac
gttgaaatttcccgttggggtgagccgcgtacgtttgattttgaagtaaaagatcacgta
gacgttgctgaaggcttaaacaacggcctagatttcgcgaccgcgagtaagctaacaggc
agccgctttgtggtaatgcgtggcgacattgctcgtttaaaccgtgcgcttgctcagttc
atgctagatacccatactcaagagcatggctatcaggaaatgtacgtgccttatcttgtc
aatgccgacagcctatacggtacaggtcagttgcctaagtttggtgaggatctattccac
actaagccagcaacggaagaggggcaggggctaagtctaattccaacggcggaagtaccg
ctaacaaacatcgcccgtgatgaaattttagatgctaaaacgctgcctgtgaaaatgacg
gcacacacaccgtgcttccgctcagaagcgggttcgtacggtcgtgacacccgtggtcta
attcgtcagcatcaattcgacaaggtagaactagtacagctagttaagccagaagatagc
ttcgacgcgctagaagcgcttactggccatgcggaagttattctgcaaaagctagagcta
ccttaccgcaaagtgttgctatgtacgggtgacatgggctttggtgcatgtaaaacctat
gatcttgaagtatggctacctgcacagaatacttaccgcgaaatctcttcatgctcaaac
atgctggatttccaagcgcgacgtatgcaggcaaggttccgcaaccctgaaaccaataaa
cctgaactgctacacacactgaacggttctggtttggcagtagggcgtacacttgttgct
attttagagaataaccaacaggcagacggtagtgttactgtacctaaagcgcttgtgcct
tacatggctggtcaggaagttattaaggcgtcgtaa
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