Alteromonas mediterranea U4: I607_10460
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Entry
I607_10460 CDS
T02720
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amal03032
]
I607_10460
03036 Chromosome and associated proteins [BR:
amal03036
]
I607_10460
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_10460
DNA replication proteins [BR:
amal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I607_10460
Chromosome and associated proteins [BR:
amal03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
I607_10460
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
I607_10460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
AGP85881
LinkDB
All DBs
Position
complement(2327432..2327719)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERLADQARHIPAKELELAIKELLEQMAQTLQKGERIEIRGFGSFSLHYRAPRV
GRNPKTGETVKLDGKYVPHFKPGKELRERVDASIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaattgaacggctcgcggatcaagcgcgtcatattccggcgaaa
gaactcgaactggcaattaaagaacttctagaacaaatggcgcaaacacttcaaaagggt
gagcgtattgaaattagaggttttggtagcttttcgcttcactaccgcgcacctcgcgta
ggtagaaaccctaaaacgggtgaaaccgtaaagctagatggtaagtatgtaccgcacttt
aagcctggtaaggaacttcgcgaaagggtagacgcctcaatcgcataa
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integrated database retrieval system
