Alteromonas mediterranea U4: I607_10485
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Entry
I607_10485 CDS
T02720
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amal03032
]
I607_10485
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_10485
Enzymes [BR:
amal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I607_10485
DNA replication proteins [BR:
amal03032
]
Prokaryotic type
DNA Topoisomerases
I607_10485
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I607_10485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AGP85886
LinkDB
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Position
complement(2332945..2335659)
Genome browser
AA seq
904 aa
AA seq
DB search
MSDNAKEILPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDFVPNYDGTEYIPEVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCVALIQDPSITIDDLMTHIPGPDFPTAAMISGRKGIEDAYRTGRGKI
YLRAKAEIETDANGKETIVVNEIPYQVNKARLIEKIAELVKEKRIEGVSALRDESDKDGM
RIVIEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNGQPKVFNLKETLECFILHRREV
VTRRTVFELRKARDRAHILEGLAIALANIDPIIELIKASQSPADAKKSLVAQGWDLGDVA
QMLERAGDDAARPDWLMPEFGIRDGKYYLTEQQAQAILDLRLHKLTGLEHEKILEEYKQL
LELIAELLHILNSPERLMEVIQEELEKIRDEFGDERRTEITAASHDIDIEDLIEQEDVVV
TLSREGYVKYQKLTDYEAQRRGGRGKSATKMKDEDIIERLLVANTHDHILCFSTRGRLYW
LKVYQLPFASRNARGRPIVNILPLEDNERITAILPIKEFEEGKYVLMATANGTVKKTDLS
LYSRPRSSGIIAVNLNEGDELIGVDITHGDDDIMLFSDAGKVVRFNEKLRDSETGEVKRD
PETGEELLALRPMGRTATGVRGIRLQDGQKVVSLIVPKGDGPVLTATENGFGKRTPLEDY
PAKSRATQGVVSIKVSERNGKVVGAVQVDDTNEIMLISDQGTLVRTRVSEVSVVGRNTQG
VRLIRTVEGEHVVGLQRIEEVEELQAFDEDGNLIIPEDASEQAETAVQEQDNAAEDGEGS
TTEE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataacgctaaagaaatcctccccgttaatattgaggaagagttaaagaactcc
tacctcgattacgcgatgagcgttattgtcgggcgagccttgcctgatgtaagagatggc
ttgaagccagtgcaccgtcgtgtgctgttcgcaatgaacgaacttaaaaacgactttaac
aagccatacaaaaaatctgcccgtgtagtaggtgacgtaattggtaaatatcaccctcac
ggtgactctgcagtttacgacactattgttcgtatggctcagccgttctcacttcgctac
atgctcgtagatgggcaaggtaacttcggctctgtcgacggcgattctgcagcggcaatg
cgttacaccgaagttcgcatggctaaaatcgctcacgaacttcttgccgacttagataag
gaaaccgttgattttgtgcctaactatgacggcacagaatatattcctgaggtattacct
accaaagtaccaaacctcctagtaaacggttcttcaggtatcgcagttggtatggcaacg
aacattccaccgcataacctcactgaagtgattaatggctgtgttgcgctaatccaagac
ccatcaattacgattgatgacctgatgacgcatataccggggccagatttcccaacagcg
gcaatgatcagcggtcgtaaaggcattgaagatgcgtaccgcaccggtcgtggtaaaatt
taccttcgcgctaaggcggaaatagagaccgatgcaaacggcaaagaaactattgttgtt
aacgaaattccttaccaggtaaataaagcacgtcttatcgaaaagattgctgaactggta
aaagagaagcgtatagaaggtgtttctgcactgcgcgacgagtctgataaagacggtatg
cgtattgttattgaggttaaacgcaacgaatcagcagaagtactgctaaatcatttatat
gccaatacccagcttcaaacggtatttggtattaatatggttgcgttagacaacggtcag
ccaaaagtatttaaccttaaagaaaccttagaatgctttattcttcaccgccgtgaagtg
gttacccgccgcactgtatttgaactgcgtaaagctcgtgaccgtgcccacatccttgaa
ggtttggccatcgcgcttgccaacatcgacccaattatcgagttgattaaagcatcacaa
agcccagcagatgcgaagaagtcacttgttgcgcaaggttgggacttaggtgatgtagcg
caaatgctggagcgcgccggtgatgacgctgcacgccctgactggttaatgcctgagttt
ggtattcgcgacggcaagtactacttaactgagcaacaagcgcaagctattcttgacctt
cgtttacacaagctaacgggtcttgagcatgagaagatccttgaagaatacaagcagctt
cttgaacttatcgctgaattacttcacattctaaatagccctgagcgtttgatggaagtc
attcaagaagagcttgaaaagatacgtgacgagttcggcgacgagcgtcgtaccgaaatt
accgctgcaagtcacgacatagatattgaagaccttattgagcaggaagacgttgttgtt
acgctttctcgcgaaggctatgttaaatatcagaagctgacggattacgaagcgcaacgc
cgtggtgggcgaggcaaatcggctactaagatgaaagatgaagatatcatcgaacgacta
ctcgtagccaatacccacgatcatattttgtgcttctcaacccgtggtcgcttatattgg
ttgaaagtgtatcaattgccatttgcaagccgaaatgcgcgcggtcgtccaattgtgaat
attcttccattagaagataacgagcgtattaccgctattcttccaattaaagagtttgaa
gaaggcaaatatgtactgatggcaacagccaacggtacagtgaagaaaaccgacctaagc
ctatattctcgcccacgttcaagcggtattattgccgtaaacctgaatgaaggtgatgag
cttattggtgttgatatcacccatggtgacgatgacatcatgctgttttctgacgcaggt
aaagtggttcgctttaacgaaaagcttcgcgacagtgaaacgggcgaagtgaaacgcgat
cctgaaaccggtgaagagctattagcactacgtccaatgggacgtaccgcaaccggtgtt
cgcggtattcgtcttcaggacggtcaaaaagtggtatcactgattgttccaaaaggtgat
ggacctgttttgactgcgacggaaaacggatttggtaagcgtacgccacttgaagattac
ccagcgaagagccgtgcaacacagggtgttgtatcaattaaggtgtctgagcgtaacggt
aaagtggttggtgcggtccaagtggacgataccaatgaaattatgcttattagtgatcag
ggtacgttagtgcgtactcgtgttagcgaagtgtcagtagtaggtcgaaacacgcaaggt
gtgcgcttaatacgtactgttgaaggcgagcatgttgtaggtttacaacgcattgaagaa
gtagaagagttacaagcgtttgatgaagacggtaacttgattattcctgaagatgcatca
gaacaagcagaaactgctgttcaagagcaagataacgccgcagaagacggtgaaggctca
acgacagaagagtag
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