Alteromonas mediterranea U4: I607_11250
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Entry
I607_11250 CDS
T02720
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I607_11250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_11250
Enzymes [BR:
amal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I607_11250
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I607_11250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGP86037
LinkDB
All DBs
Position
complement(2506262..2509882)
Genome browser
AA seq
1206 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLLRQQPLDVFTPETILVESPGMQHWVSMQMANKQGVAMNID
FPLPVRFMWNTARTVLGADEVPKQSPYRREVLTWRIDNVLQDNALMDSDAFEQVNKYWQS
AGSEQEQGLQRLQLATALADVYEQYLLYRPDWLFKWENNERAVFDDMEVWQSEIWRILAK
DQPLHPARLHQMTLEALEAGNVPAHLPKRVIVFAINTMAPQLIAFFDALAQHIDIHIFHL
NPSVNYWGEAKSSSEQAKLLRLEGLKKWMEEDQSNPLLGNLGKQGRELFNLLTELDTFEI
SAFDSPDFESAGEGEDEHGQCHSRGLLDYIHNDILQAAHPQPLTHQSKNKDDSVTVMCTH
SALREVQVLHDHLLHWLSQDKTRTPSDILVMCPAIENYAPFVDAVFHRVGTKSLGATGQV
RLPCTIADRSPMDAEPLIAAFMALLQLPDSRFGVSDILDYLQLDSVQKRFSVSQDDIEQM
VVWLKQAHIHWGLNSAHKTAVSEGVNLDDTYSWWWGIRRLLMGMLAPDSEMIVSDVLTIP
DVEGQSALTLGKLIEVVALLEEFAQELTQPRTPEQWSKALIALRDACFMPTKDQQQSWDL
IAKVAADLAARCEEANYEHELTLRQVRDLLLNRFSSPDAGNHFMTGQVTVCSMLPMRSIP
FKKVCILGLNDSEFPRKSSPLGLDLMASAGRRVGDRSRRLEDRYLFLEAIISTRESLYLS
YQGNDVTNNSERQPSLVLAEFMDMLENNYALPLEKYAVHAPLHPFSEAVFAGALPSYETG
WLRLADALQYNKLGANAADTNENADVVDTSLDMATADISQSHRALATQALRLSNMQIARA
FKDPLEHFSIQRLGVNLSQSFTLLENSEPFETNALLRYQVLDAIFSSPERNNSSELDASE
LTYSEQVITFASLRGDIPNNPVAMDEVEMWKEGALALSQAMGPHDAEHKKAQFQGKYITF
TTTALEGSDALVELCAGKVDAHRALGFFISQLIFSSSDETTSYTHYPLEIYACSWEKGET
ILKKQKFAAVERETAVQLLLFIEQLYMAIYTAPTPVHLSLFGSIIPGRRNSECKPVVDSI
KPEMFGHLLRALLSADNSCETDKAVIYQVKQAIDEVCPITDNDTVDEASEKAQQIITQAA
GLFDTVELQRSLTDWQQSSGQYSADMANNPYLNWLFPQGINWSDVPHLSAFLLLAMVNNA
SQEEKL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcgctatatccctctaacaaattagaacacttaagttttcttcttactacgctt
ttacgtcaacagcctttagacgtatttaccccagaaacgatcttggttgaaagcccaggt
atgcaacattgggtaagcatgcagatggctaacaaacaaggcgtagctatgaacatcgac
ttcccactgcccgtgcgttttatgtggaatacagcacgtactgtattgggggctgacgag
gtaccgaaacaatcgccttaccgccgcgaagtactcacgtggcgtatagataatgttctt
caagataatgcgctaatggatagcgatgcattcgagcaggttaacaaatactggcaaagt
gcaggtagtgaacaagagcaggggcttcagcggcttcagcttgctacggcactggctgac
gtatacgaacaatacttgctgtatcgccctgactggttgtttaaatgggaaaataacgag
cgagccgtattcgacgatatggaagtgtggcaaagtgaaatttggcgaattttagcgaaa
gaccagcctttgcatcccgcacgcttacaccaaatgacgctggaagcgctagaagcgggt
aacgtacctgctcatttgcccaagcgcgttattgtttttgccataaacaccatggcgccc
caactcattgcgtttttcgatgcccttgcccagcacatcgatatacatatctttcacctc
aaccccagtgttaactattggggtgaagcaaaaagtagtagtgagcaagccaagctgctt
cgtttagaaggacttaaaaagtggatggaagaagaccaatccaacccactgcttggcaac
ttaggaaagcagggccgagaactgtttaacttactcaccgagctggatacgtttgaaata
agtgcattcgactcgccagatttcgaaagtgcaggtgagggagaggatgaacacggacag
tgtcattccagaggcctgctcgactacattcacaatgatattcttcaggctgctcacccc
cagccactgactcaccaatcaaagaacaaagacgacagtgtcaccgtaatgtgcacccat
tctgcactgcgcgaagttcaagtgttacatgaccacttgctgcactggttgtctcaagac
aaaacccgcacaccctctgacatattggtgatgtgcccggcgattgagaattacgcgccg
tttgttgatgcagtatttcaccgtgtgggtaccaaatctttaggcgctactgggcaggta
cgtcttccttgtactattgctgacagaagccccatggatgcagagccccttattgcagca
ttcatggccttgctacagttaccggatagccgctttggtgtatcggatattttggattac
ttacagctcgactcggttcaaaagcgcttttccgtgtctcaagatgatatagagcaaatg
gtcgtttggttaaagcaggcacacattcattggggccttaatagcgctcataaaactgcg
gtgtcagaaggcgtaaatctagacgacacctatagctggtggtggggcattcgccgttta
cttatgggcatgcttgcgccagatagcgaaatgatagtgagtgatgtacttaccattccc
gatgtggaagggcaaagcgcgttaacgttaggtaagctcatagaagtggtggcgttactg
gaggaatttgctcaagagttaacccaaccccgaacgccagaacagtggtctaaagcattg
attgcgcttcgtgacgcctgctttatgcctacaaaagatcagcagcaaagctgggatctc
atcgccaaagtcgccgcagaccttgccgcccggtgtgaagaagctaactatgagcacgaa
ttaaccttgcgacaggttcgagatcttttgctcaatcgattttcatctccagatgccgga
aaccactttatgaccggtcaggttaccgtatgctctatgcttccaatgcgaagtataccg
tttaaaaaagtgtgtattttaggcctgaatgacagtgagtttcctcgcaaatcaagcccg
ttagggcttgatttaatggcaagtgctggtcgcagggttggcgatcgctctagacgattg
gaagacaggtacttattcctagaagctattatctcaacccgggaaagcctgtatttaagc
tatcaaggtaacgatgtaacgaataacagcgaacgacagcccagtctcgttttggctgag
ttcatggatatgcttgaaaataactatgcattgccactagagaaatacgcggttcatgcg
ccgttacatcccttcagtgaagcggtttttgctggggcgttgcccagttatgaaacgggg
tggcttcgcctagccgatgcgcttcagtacaacaaattaggtgctaacgcggctgatacg
aatgaaaacgctgatgttgttgatacctcccttgatatggcgacagctgatattagccag
tcgcaccgcgcacttgcaacacaagcgctacgtttgtcgaatatgcaaatcgccagagca
tttaaagatccgcttgagcatttttccatacaaaggcttggcgtaaatttatcgcaatca
tttaccctgcttgagaacagcgaacctttcgaaaccaatgcattgctgcgttatcaggtg
ctcgacgctatattttcctcgcctgagcgcaataattcgtcagaacttgatgccagtgaa
cttacatacagcgagcaagtaattacatttgcttcgcttagaggggatattcccaataac
ccagtggcaatggatgaagttgaaatgtggaaagagggggcgctagcgctaagtcaagca
atgggccctcacgatgccgagcacaaaaaagcacagtttcagggtaagtatattaccttc
actaccacggcactagaaggcagcgacgcattagtcgagctttgcgccgggaaagttgac
gctcatcgggcgctaggctttttcatctctcaattgatattttcaagtagcgatgaaaca
actagttacacccattacccattagaaatttacgcctgctcttgggaaaaaggcgaaact
attctgaaaaaacagaaatttgctgcagttgagcgcgagaccgccgttcagttactcctg
tttatagagcagctttacatggctatttacaccgcgccaacccccgtgcatttaagtttg
tttggtagcattatacctggtaggagaaattcagaatgtaaaccagttgtcgacagtata
aaacctgaaatgtttggacacctacttagggcgctattgagtgctgacaattcctgtgaa
accgacaaagcggttatttatcaagtaaagcaggctattgatgaagtctgccccattaca
gataacgacactgtcgatgaagcaagcgaaaaagcacagcaaatcataactcaagcggct
gggcttttcgacacggtagaattacaacggtcgctaaccgattggcagcaaagtagcggg
cagtatagcgctgacatggctaataacccttatcttaactggctatttcctcaaggtatc
aattggagtgatgtgccgcatttaagtgcctttttactactcgccatggtaaacaacgcg
tctcaagaggagaagttatga
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integrated database retrieval system
