Alteromonas mediterranea U4: I607_11265
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Entry
I607_11265 CDS
T02720
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal00061
Fatty acid biosynthesis
amal00071
Fatty acid degradation
amal01100
Metabolic pathways
amal01212
Fatty acid metabolism
amal02024
Quorum sensing
amal04146
Peroxisome
Module
amal_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I607_11265
00071 Fatty acid degradation
I607_11265
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I607_11265
09145 Cellular community - prokaryotes
02024 Quorum sensing
I607_11265
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amal01004
]
I607_11265
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amal04147
]
I607_11265
Enzymes [BR:
amal01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I607_11265
Lipid biosynthesis proteins [BR:
amal01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I607_11265
Exosome [BR:
amal04147
]
Exosomal proteins
Exosomal proteins of breast milk
I607_11265
Exosomal proteins of breast cancer cells
I607_11265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Tox-PAAR-like
Motif
Other DBs
NCBI-ProteinID:
AGP86040
LinkDB
All DBs
Position
complement(2511392..2513071)
Genome browser
AA seq
559 aa
AA seq
DB search
MPLDMTANANTTEVITSPLSMLYHWEQNRGNDVFLTQPIKGEYHDYTWKQVAEQARKVAA
RLREFNFPQGSRIGIFSKNCAEWFITDLGIMMAGHVSVPIFSTAGPDTVQYVLKHADVQL
LFVGKLDNTAEQVASIPTEYLTVAFPYPNIATKQQWAEFMDIAPIKDSPVPDMDDIMTII
YTSGSTGQPKGVVHSYNTACWAARRSLDQLGINENDRTMSYLPLAHITERVLVELSSYYS
GGKIHFVEDLATFQRDVGHCQPTLFISVPRLWTKFQMGVLAKMPQKKLDTLLKIPILNKI
VAKKIRNGLGINNARLWASGSAPLAPAVIEWFAKIGINISEGWGMTENSAYGTGSVPFRH
DKIGCIGKPYDGVDIRTSEEGEIQVKSPCNMLEYYLEPEKTAEVFTEDGYLRTGDKGVID
ADGYVKITGRLKDIFKTAKGKYVTPAPIEAKFMENPIVEQVCVTGTNLPQPVALLVLSEE
AHKKDKASIESSLKKTFDAINAKLESHQVMDRVVVMKKEWSIENDLLTPTLKVKRHVLEE
RFEGIIQGDYSEKLVWVNA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgccgctagacatgacagcaaacgcaaataccacggaagtaataacatcgccattaagt
atgttgtaccactgggaacagaaccgtgggaacgatgtattccttacccagcctattaaa
ggtgaatatcacgattacacgtggaagcaagtcgccgaacaagccagaaaggtagcggcc
cgcctgcgtgaattcaattttccacaaggtagccgaattggaattttttcaaaaaactgc
gccgaatggtttattaccgacctaggcataatgatggcaggtcatgtctcggtgcctatt
ttctctacggcggggccagacactgttcaatacgtattaaagcacgctgatgtacagtta
ctttttgtgggcaagctagataataccgcagagcaggtagcgtctattccaactgaatac
ctaacggtggcgtttccttaccccaacattgctaccaagcaacaatgggctgagtttatg
gatattgcgcctattaaagattcgcctgtaccagatatggacgacatcatgaccattatc
tatacatcaggtagtacaggtcagccaaaaggcgtagtacacagctacaatactgcttgt
tgggctgctcgccgctcgttggaccagctcggcattaatgaaaacgaccgtacaatgagt
tacttgcctctggcgcatatcacggaacgagtgcttgtagagctttccagctattacagc
ggtggaaagattcactttgtcgaagacctggctacatttcagcgagatgtggggcattgt
cagccaacactatttatttctgttccccgtttatggacgaagttccaaatgggcgtgcta
gcgaaaatgccgcaaaagaaactcgataccttgttgaaaattccaattctcaacaaaatt
gtagcgaaaaaaattcgcaatggtttaggcataaacaacgcgcgtttgtgggccagtggt
tctgcaccgttagcgcctgccgtaatcgagtggtttgctaaaataggtattaatatttct
gaagggtggggcatgaccgaaaacagtgcttatggcacaggtagtgttccgttccgccac
gataaaataggttgcattgggaagccttatgatggcgtagatatccgaacgtctgaagag
ggtgagatacaggttaagtcgccatgtaatatgctggaatattacttagagccggaaaaa
accgctgaagtgtttaccgaagatgggtacttgcgtactggcgataaaggggtgatcgac
gctgatggttacgtaaaaatcacaggccgcttaaaagacatcttcaaaacggctaaaggc
aagtacgtgacgccagcgccaattgaagcgaagtttatggaaaaccctatcgtagagcag
gtatgtgtaacaggtacaaaccttcctcaacctgtggctctgctagtgcttagcgaagag
gcgcacaagaaagataaggcaagcattgaatcgagccttaagaaaacctttgatgccata
aatgctaagttggaaagccatcaagtgatggatcgtgttgtggtcatgaaaaaagagtgg
agtattgaaaacgacttacttacacccacgttgaaagtgaaacgacacgttttagaagag
cgtttcgaaggtattattcaaggcgattactccgaaaaacttgtgtgggtaaacgcgtag
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