Alteromonas mediterranea U4: I607_11275
Help
Entry
I607_11275 CDS
T02720
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I607_11275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amal03019
]
I607_11275
Messenger RNA biogenesis [BR:
amal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I607_11275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AGP86042
LinkDB
All DBs
Position
complement(2517682..2519067)
Genome browser
AA seq
461 aa
AA seq
DB search
MLHPTIDDLWFVPLGGTGEIGMNLNLYGHNGRWLMVDCGVSFDEPLVPDYKKGSNIGSTE
SEGATHRVVAPDPSFIANQKDALAGIVITHAHEDHVGAIPYLWERFRAPIYTTSFTAEVL
RRKLARSKLANRVPIIEVDAGDTLQIGPFSVNWLAITHSLPEPFALKIATPVGTVLHTAD
WKIDANPITGLPFDVNLYKQLGRENILAMVGDSTNAPKPGFSISERNCYDGLLSTIAPIK
GRVVVGCFGSNIARLISIAKVAKKTKRYMALYGRSLMNMYGIAKQQGIWPDDLPITDPQH
LGYLPPHEVLAVATGSQGEKNTALARLAKDSHPHLQLEKGDTVLFSSIVIPGNEESVERL
SKALAAKGVAVIHSEDSTLPIHASGHPCEEELKLMYHWVKPEIAIPVHGEHSHLKAHADI
AKASGVSKHYVGQNGDLYRLAPQPSIRRQVIPVGRIPVQQD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcacccaactattgacgacttgtggtttgttcccttagggggcactggcgaaata
gggatgaatctcaacttgtacggccacaatggccgttggttaatggtggactgcggtgta
tcgtttgacgagcctctcgttccagactataagaagggcagcaatattggttccactgaa
tctgaaggcgcaacacatcgtgtggttgcgccagacccttcctttattgcaaatcaaaaa
gacgcgttagcggggattgttatcacccatgctcacgaagatcacgtgggcgctatacct
tacctatgggaaaggtttagagcgccgatttatacaacgtcgtttaccgctgaggtgcta
aggcgcaagctagcaagaagtaaattggcaaatcgggtgccgataatagaagtagatgca
ggtgatacccttcaaattgggccttttagcgttaactggcttgccattactcattcgttg
cctgaaccatttgcccttaaaattgcgacgccggtaggtactgtccttcataccgcagat
tggaaaattgatgctaaccccatcacaggcttgccgtttgatgtaaatctgtataagcaa
ttaggtagagaaaatattctcgccatggtgggagattctactaatgcccccaaacctggc
ttttctatttccgaaagaaattgctacgacgggttgctgagcacaattgctcctataaag
ggtagggtagtggtaggttgtttcggcagtaatattgcgcggcttatttcaatagccaaa
gtggcaaaaaagactaagcggtacatggcgctgtatggccgttcgcttatgaacatgtac
ggtattgcgaagcaacagggtatttggcccgatgacttgccaattaccgatcctcagcat
ttaggctacctacctcctcacgaagtacttgcagtggctacaggtagtcaaggggagaaa
aataccgcgctggcgcgactagcaaaagacagccatccgcatttacagctggaaaaagga
gataccgtattattttcctcaatagtcataccgggcaatgaagaaagtgtagaacggtta
agcaaagcgttggcggcaaaaggcgtagcagttatccatagcgaggatagcacattgcca
attcacgcaagcggccacccttgtgaagaagagctcaaacttatgtatcactgggtcaaa
cctgagattgctattccggtccatggtgagcattcacaccttaaggctcacgcagacatt
gcgaaagcgagtggtgtttcaaaacattatgtagggcaaaacggcgacttgtaccggtta
gcgccgcagccaagtattagaagacaggttatcccggtgggccggatccccgttcaacaa
gattaa
DBGET
integrated database retrieval system
