Alteromonas mediterranea U4: I607_11930
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Entry
I607_11930 CDS
T02720
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amal03016
]
I607_11930 (truA)
Enzymes [BR:
amal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
I607_11930 (truA)
Transfer RNA biogenesis [BR:
amal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I607_11930 (truA)
Prokaryotic type
I607_11930 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Terpene_synth_C
Motif
Other DBs
NCBI-ProteinID:
AGP86171
LinkDB
All DBs
Position
complement(2662641..2663435)
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AA seq
264 aa
AA seq
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MGRIALGIEYDGAAVYGWQRQREVPSVQEHLEKALSTVANEPIEVQCAGRTDAGVHATGQ
VVHFNCDAPRSERAWTLGVNANLPNSVAVTWAKNVADDFHARFSATHRRYRYVIHNAKMR
PAILSSGVTHIHRELDEKKMHLAAQALLGEQDFTSFRAALCQSKTPFRNVTNVSVYRQGR
YVIIDIRANAFLHHMVRNITGALVEIGAGEQDVNWIAHLLSLKDRSKSAATAKPNGLYLV
DVTYPEEHNLPKGPLGPLFLPDCT
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaattgccttagggattgaatacgatggggctgctgtttacggttggcaacgc
cagcgggaagtacccagtgttcaagagcatcttgagaaagcattatcaacggtggccaat
gagcctattgaggtgcaatgcgctggacgcaccgatgcaggtgttcacgccaccggccaa
gttgttcactttaactgtgacgcacctcggtcagagcgtgcatggacgttaggtgtaaat
gctaatttaccaaactctgttgccgttacatgggcaaaaaatgtggctgatgatttccac
gcacgtttttcagctacccatcgccgctatcgctatgttatccacaacgccaaaatgcgc
cccgccatactcagttcgggcgttacccacattcatcgcgaattagacgaaaaaaaaatg
caccttgctgctcaagcactattgggtgagcaggattttacgtcgtttcgtgccgcgcta
tgccaaagtaaaacgccgtttcgcaacgttaccaatgtaagcgtgtaccgccaaggtcgc
tatgtgattatagatatccgtgccaatgctttcctgcatcacatggttcgcaatatcact
ggcgcgcttgttgaaattggggcaggggagcaagatgtaaactggattgctcacctgtta
agtttaaaagatagaagcaaatctgcagccacggcgaagccaaacggtttgtacctggta
gacgtaacttaccctgaagagcataacctgcctaaagggcctttggggccgctgtttctg
ccagattgcacatag
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