Alteromonas mediterranea U4: I607_12215
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Entry
I607_12215 CDS
T02720
Name
(GenBank) acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal00061
Fatty acid biosynthesis
amal00071
Fatty acid degradation
amal01100
Metabolic pathways
amal01212
Fatty acid metabolism
amal02024
Quorum sensing
amal04146
Peroxisome
Module
amal_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I607_12215
00071 Fatty acid degradation
I607_12215
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I607_12215
09145 Cellular community - prokaryotes
02024 Quorum sensing
I607_12215
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amal01004
]
I607_12215
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amal04147
]
I607_12215
Enzymes [BR:
amal01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I607_12215
Lipid biosynthesis proteins [BR:
amal01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I607_12215
Exosome [BR:
amal04147
]
Exosomal proteins
Exosomal proteins of breast milk
I607_12215
Exosomal proteins of breast cancer cells
I607_12215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AGP86228
LinkDB
All DBs
Position
complement(2731024..2732676)
Genome browser
AA seq
550 aa
AA seq
DB search
MEKTWLKHYDPRVSAEIDADRYASVVDIFEQSVKKFKNKEAFINMGHSISFEELDTLSAQ
FAAYLQASGLKRGDAVAIMMPNLLQYPVAMFGILRAGMVVVNVNPLYTARELKHQLNDAN
AKAIVIVENFACTLEEVIADTNLQEVFLTALGDMLPAPKRWIVNAVVKYVKKMVPSFTLP
ETTSFMSAVKKGQSLKYTRPEIDSGDIAFLQYTGGTTGVSKGAMLTHRNMVANLEQVSGI
LETVIEEGEDFVVTALPLYHIFALLANCLMFVKYGCRNLLITNPRDMPAFVNELSKYPFT
ILPGVNTLFNGLLNTPGFDELDFSKFKFGLGGGMAVQRPVAEKWEKVTGTVLLEGYGLTE
CSPVVAVNPPQIEAYKGAIGMPVPSTDIKLLDDDGNPVEKGEPGEMWVKGPQVMKGYLNR
PEATEDILKEGWLATGDIATVDDEGYFYIVDRKKDMILVSGFNVFPNEIEEVAAMHDHIV
EAAAVGVPHEVSGEVVKLFVVKNNDALTEKDVIAHCRNHLTGYKVPKQVVFKDDLPKTNV
GKILRRELRD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaacctggcttaagcattacgaccctcgcgtttccgcagaaattgatgctgat
cgttacgcatctgtagtagacattttcgagcagtcggtaaagaagtttaaaaataaagaa
gccttcattaacatggggcattcaatttcgtttgaggagctagatacgctttcagctcaa
tttgctgcttacttacaagcaagcgggcttaagcgcggtgatgcggtggcaattatgatg
cctaaccttctccaatatcctgtcgccatgtttggtattttgcgcgcaggtatggtggtg
gtgaatgtaaacccgctctacacggccagagaactaaagcatcaacttaacgacgccaat
gctaaagccattgtaattgttgaaaactttgcatgtactcttgaagaagtgattgcagat
acaaaccttcaagaagtctttttgaccgcactgggcgacatgttgcctgcaccgaagcgc
tggattgttaatgcagtagttaaatacgtcaaaaagatggtgccttccttcaccttgcct
gaaactacttctttcatgtcggcagttaaaaaaggtcagtcgcttaaatacacgcgacct
gagattgatagcggcgatatcgcgttcttgcaatatacaggtgggacaacgggcgtatcg
aaaggcgcaatgctgacacaccgcaatatggtggcaaacctagagcaggtctcgggtatt
ttagaaaccgtaattgaagaaggtgaagattttgttgtaacagcactaccgctttaccac
atctttgcgttactggctaactgcctgatgttcgttaaatacggttgtcgcaacttgctt
attactaacccgcgagacatgccggcgtttgtaaacgaactaagcaaatacccgttcacc
attttacctggcgtaaacaccttgtttaatggtcttttgaatacaccagggtttgatgag
cttgattttagcaagttcaaatttggtctaggtggcggcatggcggtacagcgtcctgtt
gccgaaaagtgggaaaaggttacgggcacggtgttgttagagggctatggccttactgaa
tgttcgcctgtggtagcggtaaacccacctcaaattgaagcctataaaggcgcaattggt
atgccggtaccttctactgatattaagttattagacgacgatggcaatccagttgaaaaa
ggtgagccaggcgaaatgtgggtaaaaggcccgcaggtgatgaagggatatttgaaccgc
cctgaagcaacagaagatattctaaaagagggttggctagccactggcgatattgctacc
gtagatgatgaaggttacttctatattgttgaccgtaaaaaggatatgatcctagtctca
ggctttaacgtgttccctaacgaaatcgaagaagtcgctgctatgcacgaccacatcgtt
gaagcggctgcggttggggttcctcatgaggttagcggcgaggttgtgaagttgtttgtg
gtcaaaaacaacgacgcgctgaccgagaaagacgttatcgcgcactgccgtaaccactta
acgggttacaaagtgcctaagcaagttgttttcaaagacgacttaccaaagaccaatgta
ggtaaaattctgcgtcgggagcttcgagactag
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