Alteromonas mediterranea U4: I607_12405
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Entry
I607_12405 CDS
T02720
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal03030
DNA replication
amal03430
Mismatch repair
amal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I607_12405
03430 Mismatch repair
I607_12405
03440 Homologous recombination
I607_12405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amal03032
]
I607_12405
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_12405
Enzymes [BR:
amal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I607_12405
DNA replication proteins [BR:
amal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I607_12405
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I607_12405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_14
AAA_22
RuvB_N
AAA_16
AAA_2
AAA_18
AAA_5
Rad17
ResIII
AAA_19
AAA_30
AAA_7
nSTAND3
AAA_24
ABC_tran
AAA_assoc_2
PIF1
CoV_S2
Motif
Other DBs
NCBI-ProteinID:
AGP86266
LinkDB
All DBs
Position
complement(2774010..2776778)
Genome browser
AA seq
922 aa
AA seq
DB search
MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGANPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSR
EQIVGQLTHILQQEQLAFEAPALALLARAAQGSMRDALSLTDQAIAQGGNQVMASVVTDM
LGLMDKNQLLKVIHAVVNKSPAEVLQLVNDIAEQAPDYDNVHSELASLLHQIALTQWVPE
ACKLETTSAKAIFQLAKTISAEQVQLLYQIALQGRKDLPFAADGKSAFEMTLMRMMAFAP
NAPIAETVDEIENGRSEHNLPVNHASPSGGPGNVSKQEEPPLSETSATIDQGEAQIEAQP
EHKPTSPKTPPQSPIADASTDLPSSAPAETVANEEEPTAVSNTQTNTAAETDIAFEANLS
SASEAQEPQSNASVEDEEASPVAQYFDEPPLDAYMDDMPPLQDESGHYELDTPESERIVE
PSPSAEEQLTSTADMLALRQKLKQKKAQDADAKSSSAANAKTQSASEIQARFTRSKTDAA
STVADEKNSPEPINSPELSNSPELSNSPEPINSPALEAAPESEQSQDSITAHQSANALND
GSDTQLLGGSEQTSTNADFADNNDSGHDAFALDDFEEDMPFSNDESDANYNPNPQVEDAP
PWDTGKSVQDGHSVEPSLTPVPRANELESKEHGFYERGENAGERSFTRDALDFDTPLSTT
YEGSLHAYLSDGSKLTHASQIDDWSNLVEQMPVAGLLKQLVLHAAFSRNGNHVSLEIHHS
QTHLLKDSAKKQLIDAIHHGLGENVEVSITLGEPLSTPFALQQEIHAMRHAHAHSVIKTD
ETIQALLSTFDGSVLTDTVKAR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtactggcaaggaagtggcgaccaggcaagttcagtgaacttgtaggt
caagagcacgtagtgtctgctatttcaaatgcgctcgataacgaccgtttacaccatgct
tatctttttacaggtacgcgtggtgttggtaaaacgaccattgctcgtattttttcaaaa
agccttaactgtgaggaagggcaaggggcaaacccttgcggtcaatgcaatacctgtaaa
gaaatagagcagggtaattacgttgacttgcttgaaattgacgcggcatcaagaaccaaa
gtggaagacactcgagagcttcttgataacgtacaatacaagccaacccgcgggcgctac
aaagtgtaccttatcgatgaggtacacatgctttctaaacatagctttaatgcgctgtta
aaaacgctagaagagccgcctccgcatgtaaagttcttgttggcgacaacagatccacaa
aaactccccatcaccattttatcgcgatgcttgcagtttaacctgaaagcgatgtcgcga
gagcaaatagtcggtcagcttactcatatacttcagcaagagcagcttgcttttgaggcg
cctgctttggctttgctggctagggcggcacagggcagtatgcgtgatgcgctgagttta
accgaccaagcaattgctcagggtgggaatcaagtaatggcgtcggttgttaccgacatg
cttggcctgatggacaaaaaccagcttttgaaagtaattcatgcggtggtgaataaaagc
cctgccgaggttttgcagttggttaacgacattgctgaacaagcacctgattatgacaat
gtgcatagtgagttggcgagcttgcttcaccaaattgcgttgacgcaatgggtgccagaa
gcctgcaagcttgaaaccacgtcggcaaaagcgatatttcaattagccaaaactatttct
gcagaacaagtacagctactttatcaaattgcattgcaaggcagaaaagatttacctttt
gctgccgatggtaaaagcgcgtttgaaatgacgctaatgcgtatgatggcctttgcacca
aacgcgccaatagctgaaaccgtagacgagatagaaaacgggaggagtgagcataattta
cctgtaaaccatgcttctcccagtggtggcccgggaaacgttagtaagcaggaggaaccg
cctttaagcgaaacttctgcaacgatagaccaaggcgaagcgcaaattgaagcgcagcca
gagcataaacctacttcacctaagacaccgccacagagtcctatagctgatgcgtcgacg
gatcttccgtcatcagctcccgctgaaaccgtagcgaacgaagaagagcccaccgcggtt
tctaatacgcaaacaaatacggccgctgaaactgatatagcgtttgaagcgaatctttcc
agtgcatctgaggcacaagagcctcagagcaatgcatcagttgaagacgaagaagcaagc
cctgttgctcaatattttgatgaaccaccgctagacgcttatatggatgacatgccacct
ctacaggatgagagtggccattacgaattggacacgcccgaaagcgagcgtatagttgag
ccatcgccgtcagcagaagaacagttaacctctaccgccgatatgctggcattgcgccaa
aaactcaaacaaaaaaaagcgcaagatgctgacgcaaaaagtagtagtgcggctaatgct
aaaacgcaaagcgctagtgaaatacaagcgcggtttactagaagtaaaacggacgctgct
agcacagtggctgatgaaaagaacagccctgagccgatcaacagccctgagctaagtaac
agccctgagctaagtaacagtcctgaacccattaacagtccagcgcttgaagccgctcca
gagtccgaacaaagccaagacagtataactgcccatcagagtgccaatgcgcttaacgac
ggtagcgatacacaattacttggtggtagtgaacagacaagcacaaatgctgactttgca
gataacaatgattccggtcatgatgcctttgccctagatgattttgaagaggatatgcct
ttttcaaatgatgagagtgacgcaaattataaccctaacccgcaggtagaagatgctccg
ccttgggatacagggaagtcagttcaagacgggcattcagttgagccgtcacttacgcct
gttcctcgcgccaatgaactcgagagcaaggaacacggcttttatgagcgtggtgaaaat
gccggtgaacgttcatttactagggacgcattagattttgatacgcccttaagtacaact
tatgagggtagtttacacgcttatctttccgatggaagtaagctgactcacgccagtcaa
attgatgactggagcaacttggttgagcaaatgccggtagcaggcttgcttaagcagttg
gtattacatgcggcattttcgcgaaatggcaatcacgtgtcccttgaaattcaccatagt
cagacgcatttattaaaagacagtgctaaaaagcagttaattgatgcaattcatcacggc
ctgggtgaaaacgtagaagttagtattacgttgggtgaaccgttatccacgccgtttgca
ttacagcaagaaattcatgccatgcgacacgcgcatgcgcactcggttattaaaaccgat
gagacgattcaagcattgctatcgactttcgatgggtcagtgctaaccgatacggttaaa
gcgcgatag
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