Alteromonas mediterranea U4: I607_12590
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Entry
I607_12590 CDS
T02720
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal00260
Glycine, serine and threonine metabolism
amal00460
Cyanoamino acid metabolism
amal00630
Glyoxylate and dicarboxylate metabolism
amal00670
One carbon pool by folate
amal00680
Methane metabolism
amal01100
Metabolic pathways
amal01110
Biosynthesis of secondary metabolites
amal01120
Microbial metabolism in diverse environments
amal01200
Carbon metabolism
amal01230
Biosynthesis of amino acids
amal01240
Biosynthesis of cofactors
amal04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
I607_12590 (glyA)
09102 Energy metabolism
00680 Methane metabolism
I607_12590 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I607_12590 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
I607_12590 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
I607_12590 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
I607_12590 (glyA)
Enzymes [BR:
amal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
I607_12590 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGP86303
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Position
complement(2821952..2823208)
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AA seq
418 aa
AA seq
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MFSREMNIADFDPELANAMANEVERQEHHIELIASENYCSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVFMALLDAGDTVLGMS
LSEGGHLTHGSHVNFSGKTYNAVQYGLDKETGEIDYAQVEALAKEHKPKMIIGGFSAYSG
IVDWAKFREIADSVGAYLLVDMAHVAGLVAAGVYPNPLPHAHVVTTTTHKTLAGPRSGLI
LSSCGDEAIYKKLNSSVFPGNQGGPLCHVIAAKAVAFKEALQPEFKAYQQQVVANAKAMV
SVMQERGYNIVSGGTDNHLFLLDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFKEEQAKQVATWICDILDNMGDESVIKRVQSEVVALCAQFPVYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcgcgaaatgaatatagctgacttcgatcctgaattagccaatgcaatggcc
aacgaggttgagcgtcaagaacatcacattgagctaattgcctctgagaactactgtagc
ccacgtgttatggaagcacagggttcacagcttactaataaatacgctgaaggctaccca
ggaaagcgctactacggtggctgtgagcacgtagacgttgttgagcaacttgctatcgac
cgtgcaaaagaactatttggtgcagattacgcaaacgttcagccgcacgcgggttctcaa
gcaaactcggccgtatttatggcgctacttgatgcgggcgacaccgtactaggtatgagc
ctttctgaaggtggacaccttactcacggttcacacgtaaacttctctggtaaaacgtac
aacgcggtacagtacggtttagataaagaaacgggcgaaattgattacgcacaggttgaa
gcactagcgaaagagcacaagccgaaaatgattatcggtggtttctctgcgtattcaggc
attgttgattgggcgaaattccgcgaaatcgcagatagcgttggtgcatatttgcttgta
gatatggcgcacgttgccggtcttgttgccgctggtgtttatccaaacccacttccacac
gcacacgtggtaacgaccaccacacacaaaacgcttgcgggccctcgtagtggtctaatc
ctttcttcatgtggcgacgaagcgatttacaaaaagcttaacagttcggtattcccaggc
aaccaaggtggcccactttgtcatgttattgcggctaaagcggtagcgttcaaagaagca
ctgcagccagagtttaaagcgtatcagcagcaagtggttgcaaacgcaaaagcgatggtg
tctgtcatgcaagaacgtggctacaatatcgtatctggcggtactgacaaccacctgttc
cttttagacctaatcgacaaagatattacgggtaaagatgctgacgccgcactaggtgca
gcaaatatcacggtaaacaagaactcggtaccaaacgacccgcgctcaccgtttgtaaca
agcggtcttcgcattggtagcccagcgattacgcgtcgtggttttaaagaagaacaagct
aagcaagttgctacgtggatttgcgacatccttgataacatgggcgatgagtctgttatt
aagcgcgttcaaagcgaagtggttgccctttgcgcacaattccctgtttataagtaa
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