Alteromonas mediterranea U4: I607_12610
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Entry
I607_12610 CDS
T02720
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_12610
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I607_12610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_14
AAA
SLFN-g3_helicase
RecA
ABC_tran
GvpD_P-loop
Zeta_toxin
Viral_helicase1
nSTAND3
AAA_24
AAA_16
KdpD
Rad51
AAA_22
cobW
NTPase_1
AAA_29
Zn_ribbon_8
zf_UBZ
Motif
Other DBs
NCBI-ProteinID:
AGP86307
LinkDB
All DBs
Position
complement(2826998..2828365)
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AA seq
455 aa
AA seq
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MAKRKTAYVCSDCGAEFPRWQGQCSECKAWNTISEFVVVSAKSATRQTTSGYAGQTAAKI
ETLNAIDLESLPRFSSTFKELDRVLGGGIVPGAAMLIGGSPGAGKSTLLLQVMCQMAKSE
SALYVTGEESLQQVAMRAKRLSLPDDKLMMLAETNVETICDLALTQKPKIMVIDSIQVMH
VSDVQSAPGSVSQVRESAAYLTRFAKQNHIAMFIVGHVTKDGNLAGPKVLEHCIDSSMML
EGESDGRYRTLRSHKNRFGAVNELGVFAMTEKGLKEVSNPSAIFLSRGDNETPGSSVMVI
WEGTRPLLVEIQALVDYSQMSNPRRIAVGLDQNRLSMLLAVLHRHGNVQMNDQDVFVNVV
GGVRVSETSADLALLLAMISSFRNRSLPRDLIVFGEVGLAGEIRPVPNGTERIIEAAKHG
FKRAVVPKANAPKQAINGMKVVPVARLSEALDALE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtaaaactgcttatgtatgttctgactgtggggcagagtttcctcgctgg
caagggcagtgttcagaatgtaaagcgtggaataccataagcgagtttgttgtagtaagt
gcaaaaagcgctacgcgtcaaactacgtcgggctatgctggacaaacggcggctaaaatt
gaaacgttgaacgccattgatcttgaatctcttcctcgtttttcgtccacttttaaagaa
ctcgatagggtgttgggtggcggtattgtccccggcgctgccatgttgataggcggctca
ccaggcgcaggtaaaagtacgttgcttttgcaagtaatgtgtcaaatggcgaaaagcgaa
agcgccctctatgtaacaggggaagaatcgttgcaacaagtggccatgcgggcgaagcgg
ttaagccttcctgacgataagttgatgatgctggcagaaacaaacgttgaaaccatttgc
gatttagcgcttacccaaaagcctaaaattatggttatcgactccattcaggttatgcat
gtttctgatgttcagtcggcgcctggtagtgtatctcaagttagagagagtgcggcttat
ttaacccgctttgccaagcaaaaccatattgccatgtttatcgttggtcacgtaaccaaa
gacggcaacctcgcgggccctaaagtactcgaacactgtatcgacagttcaatgatgttg
gaaggggagagtgacggccgctaccgtacgttgcgaagccacaaaaaccgctttggtgca
gtcaacgagcttggtgtgtttgccatgacagaaaaaggattgaaagaggtaagtaaccct
tctgctattttcttaagtcgtggcgataacgaaacgccgggttctagtgtcatggtaatt
tgggaaggtacgcgcccattgctggtggaaatacaagccttggtggattactcacaaatg
tctaaccctaggcgaattgcagttggccttgatcaaaaccgattatccatgctgctagcg
gtgcttcatcgccatggcaatgtgcaaatgaatgaccaggatgtatttgtcaatgtagta
gggggcgtgcgcgtttccgagaccagcgctgaccttgcgctacttctggccatgatttct
agctttcgaaaccgctctttaccgcgcgatttaattgtatttggtgaggtgggcttagcc
ggtgaaattcgccctgttccaaacgggacagagcgcattattgaagccgcgaaacacggc
tttaaacgcgccgttgtgcctaaagcgaatgctcctaagcaagccataaacggtatgaaa
gttgtgcctgtagcccgtctatcagaagccttagatgcgctagaatag
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