Alteromonas mediterranea U4: I607_14705
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Entry
I607_14705 CDS
T02720
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I607_14705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_14705
Enzymes [BR:
amal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
I607_14705
DNA repair and recombination proteins [BR:
amal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I607_14705
Prokaryotic type
I607_14705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Virulence_RhuM
Motif
Other DBs
NCBI-ProteinID:
AGP86726
LinkDB
All DBs
Position
complement(3295558..3296223)
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AA seq
221 aa
AA seq
DB search
MTSLTWQSALGNEKQKEYFVELLERVKQARETGSVIYPPQPDVFNALKYTPLDKVNVVIL
GQDPYHGPNQAHGLCFSVQAGVKTPPSLKNMYKELLTDIDGFVEPNHGTLTPWAEQGVLL
LNTVLTVEQGKAHSHAKWGWETFTDKVIDVVNANCENVVFLLWGSHAQKKGKHIDREKHK
VLHAPHPSPLSAHRGFLGCKHFSQTNEYLVEKGKTPINWQV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactaacatggcaaagcgcgctaggtaacgagaaacaaaaagagtactttgtt
gagttacttgagcgcgtaaagcaagcgcgtgaaacgggtagtgttatttacccgcctcag
cctgatgtattcaatgcgctaaaatacacgccgctcgataaagttaatgtggtgatacta
gggcaagatccttatcacggccctaatcaagcccacggcctttgtttttctgttcaagca
ggtgtgaaaacgccgccgtcgcttaaaaacatgtacaaggagctattgaccgatatcgac
ggttttgtcgagcctaatcacggtacgctgacgccatgggcagagcaaggtgtgttgtta
cttaataccgtacttaccgtagagcagggcaaggcacacagccatgcgaagtgggggtgg
gaaaccttcaccgacaaagttatcgatgtagtaaatgcgaactgcgagaacgtggtattt
cttttgtggggcagtcatgcgcaaaagaagggtaagcatatagaccgcgaaaaacacaaa
gtgttacacgcaccgcacccttcgccgctttcagcccatagaggctttctagggtgtaag
cattttagccaaaccaacgaataccttgttgagaaaggcaaaaccccaatcaactggcag
gtgtaa
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