Alteromonas mediterranea U4: I607_16500
Help
Entry
I607_16500 CDS
T02720
Name
(GenBank) DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal03030
DNA replication
amal03430
Mismatch repair
amal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I607_16500
03430 Mismatch repair
I607_16500
03440 Homologous recombination
I607_16500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amal03032
]
I607_16500
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_16500
Enzymes [BR:
amal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I607_16500
DNA replication proteins [BR:
amal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I607_16500
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I607_16500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGP87078
LinkDB
All DBs
Position
complement(3720550..3721230)
Genome browser
AA seq
226 aa
AA seq
DB search
MIKQFIQACASVFFDKNRFKAKLRERYVGKTSFAAIDLELTSLQPSKTQITSLGYVEGKG
MRISLASSGYHVINTRADLGQSPVIHGLTQDILERGEELDEALRHLLPLLKRNILIFHNA
KLDLMALDRAFKQNNLQTVEVIYIDTLQLALYQLNKQHQVLPNNSATLTVCRQRLDLPAF
PAHNALDDALATLQLFFAQLNELGVTGEDSLKALLHTKAVGQYQLG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgataaagcagtttatacaagcgtgcgcctcagtgtttttcgataaaaacaggtttaaa
gcaaagcttcgagaacgctatgtaggtaagacttcatttgccgctatcgatttagaactt
acctccctgcagccgtctaaaacacaaataacctcattgggttatgtggaaggtaagggg
atgcgaatttctcttgcatcaagcggatatcatgtaattaatacacgtgccgacttaggg
caaagcccggtcattcatggtttaacgcaagacatattagagagaggagaggagcttgac
gaagcactgcgtcacttactgccactactaaagcgtaatattctgatatttcataacgct
aaacttgacctaatggcacttgaccgggcgttcaagcagaataatttacaaacagtagag
gtgatttacattgataccctacaactggcgctatatcagttaaacaaacaacatcaggtt
cttcctaataatagcgctacgcttacggtgtgtcggcagcgcttagacttacccgccttt
cccgcccacaatgcattagacgatgcgttagccacgttacagttattttttgcccaacta
aacgaattaggggttaccggcgaagactcattaaaggcattgcttcataccaaggctgtg
ggtcaatatcaattaggctga
DBGET
integrated database retrieval system
