Alteromonas mediterranea U4: I607_17205
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Entry
I607_17205 CDS
T02720
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I607_17205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_17205
Enzymes [BR:
amal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I607_17205
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I607_17205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_30
PriA-like_WH
AAA_19
Zot
Motif
Other DBs
NCBI-ProteinID:
AGP87213
LinkDB
All DBs
Position
complement(3882683..3884872)
Genome browser
AA seq
729 aa
AA seq
DB search
MAFIQVAVPVPLRQLFTYTHDSALEAGVRVMVPFGPRKLVGVVVETLRKSESEIDNSNKL
KAIEMVLDHQPIVDGVLLKMAQWLWQYYHHAPGEVLHAMLPVLLRKGESAGPTPQDMLML
TDEGKKTLSASLSRAPKQNACFTALTKRAMLAIEARKQFGAPAVKALVEKSLAVIKEVTP
EFKPGAWLSTLTMAEKPVPDTEQSVAIAALNRQHGNFAVSLLEGVTGSGKTEVYLQAIEP
LLREGKQVLILVPEIGLTPQTVSRFEKRFGIAVGVLHSQLSDKDRLQVWQRAKAGELGIV
IGTRSAIFTPLNNPGMLIVDEEHDESFKQQDGLRYHARDLAAMRAKQHNIPLLLGSATPA
LETLNNALSGRYAHLQLTKRAGGAQSTHQHVLDARDQPIHYGISQGLLTIMRQHISAGNQ
VLVFVNRRGYAPALLCHHCGETVTCKRCERPYTVHKAQNRLQCHHCGGMRAMPTNCEACH
YNELVTAGTGTEQVEQGLASLFPGVTQVRIDSDTVRGKDKLHQTLDAINRQEYQLLVGTQ
ILSKGHHFPHVTLVAVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMWLQTHN
PHHPLLQDLVHNGYGHFARHALMERKAASLPPFISQFVIRAEATDSSLAYRFLQDCKQVF
TQAHAIEISGPFPCLIEKRQGRFRFMLVCSHQKRAPLHNALRLALPFLQALPQATKVRWS
IDIDPTDFS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggccttcattcaagttgctgtaccagtgccgctgcgccaacttttcacatatacccac
gatagcgcactagaagcaggcgtacgggtaatggtgcctttcggtccgcgcaaacttgtg
ggcgtagttgttgaaacactacgaaaatcagagagcgaaattgacaatagcaacaagcta
aaagccattgaaatggtgctagatcatcaacctattgttgatggggtgctgctaaaaatg
gcgcaatggctgtggcagtactaccaccatgctccgggtgaagtgttacacgccatgctg
cctgtattattgcgaaaaggcgagtcggcaggccctactccacaagatatgctcatgctt
accgatgagggtaaaaaaacgctgtcagcgtcgctatctcgcgccccaaagcaaaacgcg
tgttttaccgccttgaccaaacgggcgatgctcgcgatagaggcgcgtaagcagtttggt
gcgccagcggtaaaagccttggtagaaaagtcgcttgctgttatcaaagaggttactcct
gaatttaagccgggcgcttggctatctacgttaacaatggcagaaaaacctgttcccgat
actgagcagtcagttgccatcgccgcccttaaccgtcaacacggcaactttgcggttagt
ttacttgaaggggtgaccggtagcggcaaaacagaagtataccttcaagcgatagagcct
ttactgcgcgaaggaaagcaggtgcttatccttgtgcctgaaattgggcttaccccgcaa
actgtatcccgcttcgaaaagcgctttggcattgccgtgggcgtattgcattcgcaactt
tcagacaaagaccggctgcaagtatggcagcgagcaaaagcgggcgagctcggcattgtt
ataggtacccgctctgctattttcaccccgcttaataacccgggtatgcttattgttgat
gaagagcacgacgagtcgtttaagcagcaggatgggcttcgctatcatgctcgcgatttg
gcggccatgcgtgcgaaacagcataatattcctttactgcttggcagtgccacccctgct
cttgaaacccttaataatgcgctaagcggccgctatgcgcacttacaactcaccaagcga
gccgggggcgcgcaaagtacccatcagcacgtattagatgcgcgcgaccagccaattcac
tacggtatttcacaaggcctgttaaccataatgcgccagcatattagcgcagggaatcag
gtgttggtgtttgtaaatcgccgaggctatgcgccagcgttactttgtcatcattgcggc
gagacagtaacgtgtaagcgttgcgagcgaccttacaccgtacacaaagcgcaaaaccga
ttgcagtgccaccattgcggcggcatgcgtgctatgccaacaaactgtgaagcttgccat
tacaacgagctagttactgcgggtaccggtacagagcaagtagagcaggggcttgctagc
ttgtttcccggggtaacgcaggtgcgaatagacagcgatacggtgcgcggtaaagataag
ttacatcaaacgctcgatgcaattaaccgccaagaatatcagctgcttgtgggcacccag
attttgtctaaaggccaccactttcctcacgttacattagtggcggttctcgattgcgat
ggcgcactgtttagcgcagacttcagagcccctgaaaagcttgctcaactggtaactcaa
cttgctggaagagcggggcgtgcaagtaaacccggtgaaatgtggctgcaaacccataat
cctcatcacccgctgctacaagatttggtgcataatggttacgggcactttgccaggcat
gcgttaatggagcgaaaagcggcaagcttgcccccgtttattagtcagttcgtaatacgc
gccgaagctactgatagcagtttggcttatcgatttttacaagactgtaagcaggtattt
acgcaagcgcacgccattgagataagcggcccgttcccatgcctaattgaaaagcgccaa
ggccgatttcgattcatgctggtgtgtagtcatcaaaaacgcgccccgcttcataatgcg
ctgcgtttggcgcttccgtttttacaggctttaccgcaggccactaaggtaaggtggtca
atcgatatcgatcctaccgatttcagttag
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