Alteromonas mediterranea U4: I607_17265
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Entry
I607_17265 CDS
T02720
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amal03021
]
I607_17265
Transcription machinery [BR:
amal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I607_17265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
GntR
HTH_3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AGP87225
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Position
complement(3894288..3895142)
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AA seq
284 aa
AA seq
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MSNNLQSMALSVPHSGSIEGYIQAVSSIDMLSAEEERELAVRLREDEDLQAARKLVMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTHDEVQTVANELGVSTKEVLQMEARMSSQ
DQAFDLSADEDETGNFAPVQFLEDKSSDVETDVINNDWDTAASKRLYSAIKTLDDRSQDI
IETRWLADNKITLQDLADKYQVSAERVRQIEKNAMKKLQAAMVA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaatttgcaatctatggccctgtcagtgccacacagcggtagcattgaaggc
tacatccaagctgtaagcagcattgatatgcttagcgctgaggaagagcgcgagttggca
gtgcgccttcgcgaagacgaagacttacaagccgctcgtaagctggtaatgtcacatctt
cgttttgtagtgcacattgcaaaatcttactcaggttatggcttaccccaagccgactta
attcaagaaggcaatattggtctgatgaaagccgttaaacgcttcgacccaacagtgggc
gtacgtttggtttctttcgcggtacattggatcaaagccgaaattcacgagtttgtactt
aagaactggcgaatagttaaagttgcgaccacaaaagcgcagcgcaaactgtttttcaac
ctgcgtaaggccaaaaaacgcctgggttggttcacacacgacgaagtacaaaccgtagca
aatgaacttggtgtgagtacaaaagaagtgcttcaaatggaagctcgtatgagcagccaa
gatcaagcgtttgatctaagtgcggatgaagatgaaacgggcaactttgcgcctgttcaa
tttcttgaagataaatcttcagacgttgaaactgacgtaattaataatgactgggataca
gcggcgagtaagcgtttgtactcagcgattaaaacgttagatgatcgcagccaagacatt
atcgagacgcgttggttagcagataataaaatcacgctacaagacttggctgataagtat
caggtgtctgcagaacgtgttcgtcaaatcgaaaagaacgcgatgaaaaaacttcaagca
gctatggtcgcatag
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