Alteromonas mediterranea U4: I607_17340
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Entry
I607_17340 CDS
T02720
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I607_17340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amal03019
]
I607_17340
Enzymes [BR:
amal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
I607_17340
Messenger RNA biogenesis [BR:
amal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I607_17340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Oxysterol_BP
Motif
Other DBs
NCBI-ProteinID:
AGP87238
LinkDB
All DBs
Position
3908115..3909434
Genome browser
AA seq
439 aa
AA seq
DB search
MTRGEHGISREDISANALKVMYRLNGAGFESYLVGGCVRDILMGHEPKDFDVATNATPEQ
IKGLFKNCRLIGRRFRLAHIVFGREIIEVATFRGHHQESDEDENVPKAKVVAKRDSHGQL
VRDNVFGSIEEDAERRDFTFNAMYYSVADFTVTDFANGLAAIEKREVELIGDPETRYRED
PVRMLRAVRFAVKLGMRIEEKTAEPIKPLANLLQNIPPARLFEETLKLFLSGKGEVTFLM
LHEYGLIEPLFPQLAPFLKDENSREMQFVRRVLANTDERINSNQRVTPAFLYAALLWYPV
EEQSQHLQSESGLNAHDAFNIASGEVISRQTQRIMIPKRFSTVVRDIWILQQRLPKRFGR
RAFQLLTHPKFRAGYDFLLVRGQVEGGDLLELAQWWTHFQHADNGKQKGMLNALRKSEGG
AKGGPRKRKRKPAKRGPDA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtggagagcacggtatatctcgtgaagacataagtgcaaatgcattgaaagta
atgtatcgccttaatggagcaggcttcgaatcgtatttggttggaggctgtgtgcgcgat
attttgatggggcacgagccaaaagacttcgacgtggcaaccaacgcaacgccagagcaa
attaaaggcctgtttaaaaactgtcgccttattggaagacgctttcgcttggcacatatc
gtgtttggtcgagaaatcattgaagtggccacatttcgcgggcaccatcaagagtcagat
gaagacgaaaatgtacctaaagcgaaagtcgtagcgaaacgggactctcacggacagctc
gtaagggataacgtatttggctcgatagaagaagatgcagaacgccgcgactttaccttc
aatgccatgtactacagcgtggcagattttacagtaacagactttgcaaacggcttagcc
gctatagaaaagcgtgaagttgagcttattggcgatcctgaaacccgctaccgcgaagac
ccggtacgtatgttaagggctgtacgcttcgccgttaagctgggtatgcgcattgaagaa
aaaaccgcagaacccatcaagcctctggctaacctactgcaaaacattcctcccgctcgc
cttttcgaggaaacgctaaagctgtttttatctggcaaaggggaagtaacctttttgatg
ctgcacgagtacggactaattgagccgctattcccacagctggcgccatttttaaaagac
gaaaatagccgagaaatgcagtttgttcgccgcgtgctagctaataccgatgagcgtatt
aatagtaatcagcgtgttacgccggcatttttatacgccgctttactgtggtatccggtt
gaagaacagtcgcagcatttacaaagcgaatctggcttaaatgcccatgatgcattcaat
attgcgtcgggcgaggttatttcccgtcaaacacagcgtattatgatccctaagcgcttc
tccaccgtggtgcgagatatctggattttacaacagcgtttaccaaaacgttttggacgc
cgcgctttccaactgctaacacatcctaaatttagagctggctatgactttttactagta
agaggccaggtagaaggtggcgacttactagagctagcgcagtggtggacgcacttccaa
cacgctgacaacggcaagcagaagggcatgttaaacgcccttcgcaaaagcgaaggtggc
gccaaaggcggccctcgcaaacgcaagcgtaaacccgctaagcgaggtcccgatgcataa
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