Alteromonas mediterranea U4: I607_17945
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Entry
I607_17945 CDS
T02720
Name
(GenBank) ABC transporter ATP-binding protein
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
amal
Alteromonas mediterranea U4
Pathway
amal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I607_17945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amal02000
]
I607_17945
Transporters [BR:
amal02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
I607_17945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
AAA_28
AmiR_N
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
AGP87359
LinkDB
All DBs
Position
complement(4050083..4051783)
Genome browser
AA seq
566 aa
AA seq
DB search
MDSAQSLGLRRSLMSQVAVKCLSLFSLIIGFYYFSNIAQDWVVNKTPATRGDIVGLSICL
ALCWLFQGAFNALSSRGKVKVLDKLEAHLKQVFVARQHALIRQHSGYYWQTLWLQHIQAF
TDWALEYRVQQMIAVIVPLLALAVIFYVNPVIGLGLLLTLPVVPLFMIIVGKGAAALHRK
HFVALERLGSLFTDRLAALPMLASFQAHQKQTDLLKQASENLNARTMKVVSVAFLSNSVL
DFFATLAVALVAVFIGFSLLGELTIGPAITLQQGLWVLLTVPLLLSEMKKLGQVYHQKAQ
AEAAQDELYPLFSIPIQDKTHSDEKVGSYFESMNKRPSESLLAASHFNVFEMDASLYSSL
SSCESETPVLLCADSLNVSKGDKILLSGASGSGKTLLLEALGGQRPASHKFNEPVVWITQ
HPVVTPGSVRENLCLDDSYTDEALNEVLQAVELGPWLALLPYGLDTVMTDYPLLSGGEAQ
RLSLARALLREVNIWLLDEPTAHLPDSQHHRLAQLINRLGENKTLIWASHKALPANWFTH
FWAIKDGKVKVASMVSQNERQEATNE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
ttggatagcgcgcaatcgcttggcttgcgccgttcgcttatgtcacaggtagcggttaag
tgtttgtcgcttttttctttaattattggcttttattacttttctaatattgctcaagac
tgggtggtgaataaaacgcccgctacccgtggcgatatagtagggctttctatctgttta
gcgttgtgctggttattccaaggcgcgtttaacgccctttccagtagggggaaggtgaag
gtacttgataaacttgaagcacatttgaaacaggtgtttgtggcgcgtcagcatgcgcta
attcgccagcactctggttattactggcaaaccctttggctgcagcacatacaggctttt
actgattgggcgctagaatatcgcgtgcagcaaatgatcgctgtaatagtgccactgctg
gctttggccgttattttctatgtaaaccccgtgattgggcttggtttgctactgacactg
ccggttgtgccactttttatgatcatcgtggggaaaggagcggcagccttgcatcgcaag
cactttgttgcgcttgaacgactgggcagtttgtttactgaccgcttggccgcactgccc
atgttggcaagttttcaggcccatcaaaaacaaactgacctgctgaaacaagccagtgaa
aatttaaatgcgcgaaccatgaaagtggtgagtgtggcgtttctatctaacagcgtcctc
gattttttcgccacgcttgccgtggccttagtggcagtatttatcggtttttcattgctg
ggcgaattaactattgggccagcaataacattacagcaaggtttgtgggtgctgcttact
gttcccctgctattaagtgaaatgaaaaagttgggtcaggtatatcatcaaaaagcacag
gcagaggccgcgcaagacgaactatatcctttattttctattcctattcaagataaaacg
cattcagacgaaaaggtgggaagctattttgaaagtatgaataaacgaccaagtgaatct
ttacttgcagcctctcactttaacgtttttgagatggacgcgtctctttatagttcatta
tcttcttgtgaaagcgaaaccccagtgctgctctgcgcagatagccttaatgtttctaaa
ggcgataaaattttactcagtggcgcttcaggctcaggaaagacgctacttctagaagca
ctgggtgggcagcgccccgcctcccacaaatttaacgaaccggttgtgtggatcactcag
caccccgtggttacaccaggttcggtacgagagaacctatgccttgacgatagctatacg
gatgaagcgcttaacgaggtactgcaagcggtagaactcgggccgtggctagcgttattg
ccttatgggttagacacggtaatgacagactacccattactttctggaggcgaagcgcag
cgtctgtcattggctagagcattgcttagagaagtcaatatatggctattggatgagcca
acagcgcatttaccagattcccagcatcatagactggcccaactcatcaaccgcttaggt
gagaataaaacgcttatatgggcttcacacaaagcactgcccgccaattggtttacacac
ttctgggctattaaagacggtaaggtaaaagtcgcttcaatggttagccaaaacgaaagg
caggaggcaacaaatgaataa
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