Alteromonas mediterranea U4: I607_17980
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Entry
I607_17980 CDS
T02720
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amal02000
]
I607_17980
Transporters [BR:
amal02000
]
Other transporters
Pores ion channels [TC:
1
]
I607_17980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MiaE_2
Motif
Other DBs
NCBI-ProteinID:
AGP87366
LinkDB
All DBs
Position
4057898..4060015
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AA seq
705 aa
AA seq
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MEYSLLAFAVTAACTSAHVYANTSEFIDSASTEVITVIGSSLNDDVKEIEREAVTAATNI
DADFGDQLALLPGVSISRNGPVTGLIQYRGLFGNRVGVSIDGVDITGAGPNSMDSPLSHI
LPEPGLTATLYRGIVPVSAGVQTLGGKLRINADAASLFALDNDITGSVNASVIAPGSGQQ
YQGNVLYKTDQAFFSGAFMHQQRDERESGNNIVIPNSYYQRNGGKFRLGYEWGKHQFDAS
YQRLNTNESGTPALAMDIGFIDAAWYRVGYRYNAGESEYFAINWFGNSNQHAMDNFSQRM
VMSESMVRENNADAIAQGLDAKYVTPLNSGELEFGAYLHHSRNNSVITNPNNGMFFVDNF
TNAKRDTASVYAQWTVNTEAYSSTYGARYTFTTMDAGEAGSNMVMMNPAIATLVSNFNAA
ERDENYNMLDMAATTRYHASESLDIVIGISQKNRAPTYFERYTWLPLGISGGMADGFNYI
GNLELENETARKIEVGIDYNYESWTISPRLFYQDIEDYITGSPSTNMAANMVSSMMAFTE
PFQWTNTDAVIKGADMTIQGQLTDSLSVQAVATVQHGNRDDIDDALFRIAPEHLTTTVQW
NTQVFDAPLQMQLTSELVGAQNHVSALQNEASTAGYGLFHISGLLALFDNAHTNLQLTAS
IHNLFDKQYAPHTAGINRVMNAGAEVGERVPGAGREWHLSLSYRF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggagtattctttattggcattcgctgttacagctgcctgcacatctgcacacgtttat
gcaaacacatctgagttcattgatagcgcttcaacagaagtgattacagtgattggttct
tcgcttaatgatgatgtgaaggaaatagagcgagaagcggtgactgccgcaaccaacata
gacgctgattttggcgatcagttagcactactgcccggagtttctatctcgcgaaacggc
ccggttacaggcctcattcaatatcgaggcttgtttggcaatagagtcggcgtatccatc
gacggcgtcgacataacaggcgctggccccaactcaatggactcaccattatcccacatt
ttgccagaaccagggcttaccgctaccttgtatcggggtattgtaccggtgagtgctggc
gtacaaacattaggcggcaaactgcgtatcaacgccgatgcagcatcgctttttgcttta
gataacgatattactggtagtgtaaatgccagtgtaattgccccaggtagcgggcaacag
tatcagggcaatgtactttacaaaacggaccaggctttctttagtggcgcgtttatgcat
cagcagcgtgacgaacgagagtctggtaataacatcgttatacccaacagctattatcag
cgaaatggcggtaaatttagacttggctatgaatggggaaaacaccaattcgacgccagc
taccaacggctaaatacgaatgaaagcggtacgcccgccctcgctatggatataggtttc
atcgatgctgcatggtaccgggtcggttatcgctacaacgctggggagtctgaatacttt
gctataaattggtttggcaacagtaaccaacatgccatggataacttttcccagcgcatg
gtgatgtctgagagcatggtccgcgaaaacaacgctgacgctattgctcaagggttggat
gccaagtacgtgacgccgttaaatagtggcgagcttgaatttggcgcttacctacatcac
agccgaaacaattctgtaattactaaccccaacaacggtatgttctttgtcgataatttt
actaatgcaaaaagagataccgcgagtgtttatgcccagtggacagtaaatacagaagcc
tattcgtctacttatggtgcgcgatacacctttactactatggatgctggagaagcgggt
tctaacatggtgatgatgaatccagcaattgctacgttagtcagtaattttaatgctgct
gagcgtgacgaaaactacaacatgttagatatggccgctaccacccgataccatgcgagc
gaatcgcttgatatcgtaattggtatttctcagaaaaatcgcgctccaacctactttgaa
cgctacacctggctaccgcttggcatttccgggggtatggccgacggatttaattacatt
ggcaaccttgaattagaaaatgagaccgcgcgcaaaatagaggtaggaattgattacaac
tatgaaagttggaccatatcaccccgacttttctaccaagatatagaggattacatcacc
ggctcacctagtacgaatatggcggcaaacatggtgtcttctatgatggcttttactgag
ccgtttcagtggacgaataccgatgctgttatcaagggtgccgacatgacaatacaaggc
cagcttaccgatagcttgagtgtgcaagcagtagcaaccgtccagcatggtaaccgtgat
gacattgacgatgctttgttccgcattgcgccagagcatttaacaacaacagttcaatgg
aatactcaggtatttgatgcgccacttcaaatgcagcttacatctgagttagtcggcgca
caaaatcatgtttcagcactgcaaaatgaagcatcgacagcaggttatggtttatttcat
atctctgggcttttagcactttttgataatgcgcacacaaatcttcagcttacggccagt
attcataacctgtttgacaaacagtatgccccacatacagccggaattaaccgcgtaatg
aatgctggtgcagaagtaggtgagcgggtgcccggtgctgggcgcgagtggcatttgtct
ttgagctatcgtttctaa
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