Alteromonas mediterranea U4: I607_18090
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Entry
I607_18090 CDS
T02720
Name
(GenBank) LysR family transcriptional regulator
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amal03000
]
I607_18090
Transcription factors [BR:
amal03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I607_18090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
HTH_34
DUF3798
Motif
Other DBs
NCBI-ProteinID:
AGP87388
LinkDB
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Position
4078487..4079371
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AA seq
294 aa
AA seq
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MNTKLLRSLQVFISVTDSGSMSVAARELHMTVSAISQQLRKLEHDIGLSLFNRNTRSLSL
TEAGRIYYETSKQMLETAELAQQKIESLQDDPTGKINIIAPEGFGGGLLSEPLKKLCEEF
PKITISLTVTDEPKDIIASSADLVLCFAPVSDTNFSSLELATWKRILCVSARHPLANEAL
SSPAQLNSHAYITHRHIEDYVMQHDSEGEYELDTQRIDVNSMQTLIKLTQDGVGYAILPE
PEVRHLLKSGEMKQLFTEWELPDYTVYAVTPKRELVPAKISAAITCLQDLFAQI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaaattacttcgctccctacaggtttttatttcggttacagacagtggaagc
atgagtgtcgcagcccgagaacttcacatgacagtgtctgcgattagccaacagctgaga
aagctagaacacgacatcggtcttagccttttcaatcgaaatacgcgaagcttgagctta
acagaagcaggacgcatctattacgaaaccagtaaacaaatgctggaaaccgcagagcta
gcacagcaaaaaatagaaagtttgcaagatgaccctaccggtaagataaatatcattgcc
cctgaagggtttggcggcggtttactcagtgagccgcttaaaaagctatgtgaagagttt
cccaaaattactatctcacttacggtaaccgacgaaccgaaagatattattgcttcgagt
gcagacttagttctctgctttgcgcctgtttcagatactaacttcagcagtttagaactt
gctacctggaagcgcattttatgcgtatcggcacgacaccctctagcgaatgaagccctg
agttctccggcacagttaaatagtcatgcttatatcacacatcgccatattgaagattat
gttatgcaacatgatagcgaaggtgaatatgaattggatacccagcgtatagacgtaaac
tcgatgcagacactgattaagctaacgcaagacggggtaggttacgcgatattaccagaa
ccggaagtaagacacttactcaaatcaggtgaaatgaagcagcttttcacagaatgggaa
ttgcctgactataccgtttatgcggttacccctaagcgagagttggtacccgccaaaatc
agtgcagcaatcacttgcttgcaagatttattcgcccaaatatag
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