Actinomyces marmotae: HPC72_03165
Help
Entry
HPC72_03165 CDS
T07249
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amam
Actinomyces marmotae
Pathway
amam03420
Nucleotide excision repair
amam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPC72_03165
03430 Mismatch repair
HPC72_03165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amam03400
]
HPC72_03165
Enzymes [BR:
amam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPC72_03165
DNA repair and recombination proteins [BR:
amam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPC72_03165
MMR (mismatch excision repair)
Other MMR factors
HPC72_03165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
HTH_24
DUF7552
Motif
Other DBs
NCBI-ProteinID:
QKD79390
UniProt:
A0A6M8B415
LinkDB
All DBs
Position
726526..729963
Genome browser
AA seq
1145 aa
AA seq
DB search
MSDPRATGRTNQPDAKPGLSPRELAKELGLPPPTDEQAQVISHPLTPLLVVAGAGSGKTA
TMSQRVVHLVANGAVRPDQVLGLTFTRKATAELASRVSTRLGQLAEAGLLPGAGRADGGA
ELGEPTISTYNSFAAALVHDHGLGIGVDPDATLITAARAWQIVDDMLASRVTHLPLEPTR
TTVRAVLRLDGALSENLLSVEEAAEGLDDLQHLFEGLAGVRGLATIFKPRGQTMTTQRAL
LELAAEYREHKRRHGLVEFGDQIALACRIAEEVPDAARALGEQYPAVLLDEFQDTSVAQA
LLLSRLFAGGGVTAVGDPNQAIYGWRGASAGALDSFHARFNPAGTEALAQGADPALATPV
LPLSTAWRNDRRILDAANIISAPLRDHSPQPGDADVARIPVARLVPRPEAAGLADGAVHV
AFLPDPLAEAEEVAEFMARRWGPRAELAVLSRTRSQLIPIADALQARGIPHEVVGIGGML
SVPEVADLRALITAAADPERGDRLMRLLSAGDIGAADLRALHDLARRHTRGPQRSARRQA
GSAAPEPPADGQEEAPEAPLLTEALETIARRAEESGDGPIEGLSEAGRALALRLALALRR
VRAALALPLPDIIDIAERALDLDIEIAAMGPKRAGRRAVDAFRAVAEQYAADTEAPTLAG
FLNWLQIAQSEENGLDAPEPDPEPGAVQLLTTHAAKGLEWDAVAVIGMTETAFPSYRGKA
EEDGAIKTGSWTSSTEEFPHPLRADAGELPPFELGSLEPPHVDKDDVKGMWEQYALALGR
HVIAEERRLAYVAVTRARHDLLLTGSHFVKTGKTPRRMSRFLDEVLRGGGGASPATPWGA
GLTEIDDEASNPLHDATASAWWPVERPAGPGGPRAERIAAARAVDAARRASAPRAGEDPA
APMDPLVARWQAEAELLLAERRRTERALPGVRMPSHLAATSLDRLRADPAAFALDLRRPL
PPEPRAVGRLGTVFHDAIAQRLAGRAALIPLTDAGVPDALPPADRKRVERWLATAESLPL
LKGHALRATEVERELTVGGTTLRCRIDAVFATPDGSWLIVDWKTGRRRVPVDQLSVYVHA
WAASQGTPAERVRAAYAYVDVGEVDELTPADLLPLDAVGSLLAPGAAAPGDPHAPATVED
PGAGP
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatccccgggccactggccgaaccaaccagcccgacgccaagccgggcctcagc
ccccgggaactggccaaggagctcggcctgcccccgcccacggacgagcaggcccaggtc
atctcccacccgctgaccccgctgctcgtcgtcgccggcgcgggcagcgggaagactgcc
accatgagtcagcgcgtcgtccacctcgtggccaacggcgccgttcggcccgaccaggtc
ctggggctcactttcacccgcaaggccactgccgagctcgcctcgcgcgtgtccactcgc
ctcggccagctcgctgaggcggggctcctgccgggagcgggccgggccgacggcggcgcc
gaactcggtgagccgacgatctccacctacaactccttcgccgccgcgctcgtgcacgac
cacggcctgggcatcggcgtcgatcccgacgccacgctcatcaccgcggcgcgcgcctgg
cagatcgtcgacgacatgctggcctcgcgcgtcacgcacctgcctctcgaacccacgcgc
accaccgtgcgcgccgtcctgcgcctcgacggcgccttgtcggagaacctgctcagcgtc
gaggaggccgccgagggcctggatgacctccagcacctcttcgagggactcgccggggtc
agaggcctggccaccatcttcaagcccaggggtcagaccatgaccacccagcgcgccctc
ctcgagctcgccgctgagtaccgcgagcacaagcgccgccacgggctcgtcgagttcggg
gatcagatcgccctggcgtgccggatcgccgaggaggtccccgacgccgcccgcgcgctc
ggcgagcagtaccccgccgtcctgctcgacgagttccaggacacctcggtggcccaggcc
ctcctgctctcccgcctcttcgccgggggaggcgtcaccgccgtcggagaccccaaccag
gcgatctacggatggcgcggcgccagcgccggggccctcgactccttccacgcccgcttc
aaccccgcgggcaccgaggctctagcccagggggcggaccccgcgctcgccacgcccgtg
ctgcccctgtccaccgcctggcgcaatgaccggcgcatcctcgacgccgccaacatcatc
tccgcccccctgcgcgaccacagcccccagccgggggacgccgacgtggcgcgcatcccc
gtcgcgcgcctcgtcccccgccccgaggccgcgggcctggccgacggcgccgtccacgtc
gccttcctgcccgatcccctcgccgaggccgaggaggtggccgagttcatggcgcggcgc
tgggggccgcgcgccgagctcgccgtcctgtcccgcacgcgctcccagctcatccccatc
gccgacgcgctccaggcgcgcggcatcccccacgaggtcgtcggcatcggcgggatgctt
agcgtccccgaggtcgccgacctgcgcgccctcatcaccgcggccgcagaccccgagcgg
ggggaccgcctcatgcgcctgctgagcgccggggacatcggcgccgccgacctgcgcgcc
ctccacgacctggcgcgccgccacacccgcggcccgcagcggtccgcgcggcgccaggcc
gggagcgccgcgcccgagcccccggccgacggccaggaggaggcccccgaggcgccgctg
ctcaccgaggccctggagaccatcgcccgacgggccgaggaatcgggcgacggtcccatc
gagggcctgtccgaggccgggcgcgccctcgccctgcgcctggccctcgccctgcgacgg
gtccgcgccgccctcgccctaccactgccggacatcatcgacatcgccgagcgggccctc
gacctcgatattgagatcgccgccatgggccctaagcgggccggtaggcgcgccgtcgac
gccttcagggccgtggccgagcagtacgccgcggacaccgaggcgccgaccctggccggg
ttcctcaactggctccagatcgcccagtccgaggagaacgggctcgacgcccccgagccc
gaccccgagcccggcgccgtccaactcctcaccacgcacgccgccaagggcctggaatgg
gacgccgtcgccgtcatcggaatgaccgagaccgccttcccctcctaccggggcaaggcc
gaggaggacggcgccatcaagacgggctcgtggacctccagcacggaggagttcccccac
cccctgcgcgccgacgccggcgagttgccgcccttcgagctgggatccctggaacccccg
cacgtggacaaggacgacgtcaagggcatgtgggagcagtacgcgctggccctgggccgc
cacgtcatcgcggaggagaggcgcctggcctacgtggccgtgacccgcgcccgccacgac
ctcctcctgaccggatcgcacttcgtcaagacgggcaagaccccgcggcgcatgtcccgc
ttcctcgacgaggtcctgcgcggcggcggaggggcctcgcccgccaccccctggggcgcg
ggcctcaccgagatcgacgacgaggcctccaaccccctccacgacgccaccgcctcagcc
tggtggccagtggagcgccccgccgggcccggaggcccccgcgcggagaggatcgcggcc
gcccgagccgtcgacgccgcccggcgcgcgtccgcgccgcgggccggagaagatcctgcg
gcgcccatggacccactcgtggcccgatggcaggccgaggccgaattactgctggccgag
cgacgtcggaccgagcgcgcgctccccggggtgcgcatgccctcccacctggcggccacg
agcctggaccgcctgcgcgccgatcccgccgccttcgccctcgacctgcgccgccccctg
ccgcccgagccgcgggccgtcgggcggctcggcaccgtcttccacgacgccatcgcccag
cgccttgcgggtcgcgcggccctcatcccgctcaccgacgcgggcgtccccgacgccctt
cccccggccgatcggaagcgcgtcgagcgctggctcgccaccgccgagtccctgcccctc
ctcaagggccacgccctgcgcgccaccgaggtggagcgggagctcacggtgggcggcacg
acgctgcgatgccggatcgacgccgtcttcgccaccccggacggctcgtggctgatcgtc
gactggaagacggggcgccgccgcgtccccgtggaccagttgagcgtctacgtccacgcc
tgggccgccagtcaggggacgccggcggaacgggtgcgcgccgcctacgcctatgtggac
gtaggcgaggtcgacgaactcacgcccgcggatctgctgccactggacgccgtcgggagc
ctcctcgcccccggcgcggccgccccgggggacccccacgccccggccactgtggaggac
ccgggcgccgggccatga
DBGET
integrated database retrieval system
