Actinomyces marmotae: HPC72_03950
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Entry
HPC72_03950 CDS
T07249
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amam
Actinomyces marmotae
Brite
KEGG Orthology (KO) [BR:
amam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amam03016
]
HPC72_03950 (truB)
Enzymes [BR:
amam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HPC72_03950 (truB)
Transfer RNA biogenesis [BR:
amam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPC72_03950 (truB)
Prokaryotic type
HPC72_03950 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QKD79514
UniProt:
A0A6M8AZ57
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All DBs
Position
918320..919393
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AA seq
357 aa
AA seq
DB search
MSRPRVARGAVTADDGLLLIDKPAGVTSHDVVAAVRRMGATRKVGHAGTLDPMATGLLIL
GVGRATRFLTHLVGADKTYEATVRLGQETLTEDAEGEPTAWRGCPAPADEARRADLNGRL
DAALAGLTGPIMQVPSAVSAIKVNGVRSYKRVRDGEEVALAARPVTIHAITPLGALRPGA
VEGPAGQEVPVVDLDLRVTCSSGTYVRALARDLGEALGCGAHLTALRRTRVGPFDVAEAL
CLDRASAQVEAGAGDDPPSGLRTLPLAEAGRRCFPAVDLSRDEARALRHGQALPQAVLDR
EGPAPGRSSVAEAARAAGGEHREGRGVVAGFDPDGVLVALLIRESGRARPALVLSPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcccccgggtcgcccgcggcgccgtcactgccgacgacggcctcctcctcatc
gacaagcccgccggcgtcacgagccacgacgtcgtcgccgccgtgcgccgcatgggcgcc
acccgcaaggtcggccacgccggcaccctcgaccccatggccaccggcctgctcatcctc
ggcgtcggccgcgccacccgcttcctgacccacctcgtgggcgcggacaagacctacgag
gcgaccgtgcgcctgggccaggagaccctcaccgaggacgccgagggtgagcccaccgcc
tggcggggctgcccggcgcccgcggacgaggcgcggcgagccgatctcaacgggcgcctc
gacgccgcgctggccggcttgaccggcccgatcatgcaggtccccagcgctgtctccgcc
atcaaggtcaacggcgtgcgctcctacaagcgcgtgcgcgacggcgaggaggtcgccctg
gcggcgcgccccgtcaccatccacgcgatcacccccctcggggccctgcgcccgggagcc
gtggagggcccggcgggccaggaggtgcccgtcgtcgacctcgacctgcgcgtgacctgc
tcctcggggacctatgtccgcgccctggcgcgcgatctcggcgaggccctgggctgcggc
gcgcacctgaccgccctgcgccgcacccgcgtcggccccttcgacgtggccgaggccctc
tgcctggaccgggccagcgcccaggtggaggccggcgctggcgacgacccgccatcgggg
ctgcgcacgctgcccctggccgaggccgggcggcgctgcttccccgccgtcgacctcagc
cgcgatgaggctcgcgcgctccgccacgggcaggcactgccccaggcggtgctggaccgc
gagggccccgcgcccgggcgctcctcagtcgcggaagcggcgcgggccgccggtggcgag
caccgcgaggggcgcggcgtcgtcgccgggttcgatcccgacggcgtcctcgtggcactg
ttgatccgagagagtgggcgggcccggccggccctcgtcctctcaccagcatga
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