Actinomyces marmotae: HPC72_04635
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Entry
HPC72_04635 CDS
T07249
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
amam
Actinomyces marmotae
Brite
KEGG Orthology (KO) [BR:
amam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amam03032
]
HPC72_04635
03400 DNA repair and recombination proteins [BR:
amam03400
]
HPC72_04635
Enzymes [BR:
amam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPC72_04635
DNA replication proteins [BR:
amam03032
]
Prokaryotic type
DNA Topoisomerases
HPC72_04635
DNA repair and recombination proteins [BR:
amam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPC72_04635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QKD79637
UniProt:
A0A6M8B4S9
LinkDB
All DBs
Position
complement(1087680..1090199)
Genome browser
AA seq
839 aa
AA seq
DB search
MPKSATRTPPPTDGAIVEQDLSSEMRSSFLEYAYSVIYSRALPDARDGLKPVQRRILFQM
DRMGLRPDRPHVKSSRVVGDVMGKLHPHGDVAIYEALVRLAQPFTMRLPLIDGHGNFGSL
DDGPAAPRYTEARLAAPALALTADIDEDTVDFAPNYDYTLTEPGVLPAAFPNLLVNGASG
IAVGMATNMPPHNLGEVVSAARHLIEHPDATLEDLMAFVPGPDLPAGGMIVGLDGIREAY
RTGRGKFLTRATARVENVTARKKGIVVTELPYLVGPEKIIAAIKDRVASKKLQGITDVAD
LTDRKNGTRLVIGVKNGYNPEAVLAQLYRHTPLEDSFGINNVCLVDGQPRTLGLRELLEV
FVGHRLRVVERRTRFRLGKRRERAHLVDGLLIAILDIDEVIALIRSSEDAATARERLQQV
FDLSEAQASYILELQLRRLTKFSVIELEKERDELAREIEALEAILADDVLLRRVVSRELA
AVCEDFATPRRTVLLEAPGAAGPRSANGAGGSDGSAGPATVGLMAGVKAGVKDVPLTIPD
DPCRILLSATGLVARAAGAEPVPRSGARQPHDALVSQVATTARGRVGAVTDTGRLVRLDV
VSAPEVPRLEGAPSLAGGTPARLLVEIEPEERVVGLVPVGDAGANPIVLATAAGVIKRVK
VGDEPARGDSWDVISLAEGDSVVFAGTAADTDVLTLVASDAQLLRFEASKVRPQGRAAGG
MAGISLHDGARVVAASAVSADLLAEAVVVTVAASAGALPGTGGSVKVTPLDRYPAKGRAT
GGVRAQRFLRGEHELVLAWVGVGPARAVGSGGQSITLPGPDERRDASGIPTISPITAIG
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagtccgccacccgcacgccccctccgaccgacggcgcgatcgtcgagcaggat
ctctctagcgagatgcgctcaagcttcctggagtacgcctactccgtcatctactcccgg
gccctgcccgacgcccgtgacggcctcaagcccgtccagcgccgcatcctgttccagatg
gaccgcatgggactgcggccggaccgcccgcatgtgaagtcctcgcgcgtcgtcggcgat
gtcatgggcaagctgcacccccacggggacgtggcgatctacgaggcgctcgtgcgcctg
gcccagccctttaccatgcgcctgccgctcatcgacgggcacggcaacttcggctccctc
gacgacggccccgccgccccccgctacaccgaggcccgcctggccgcccccgccctggcg
ctgacggcggacatcgacgaggacaccgtcgacttcgccccgaattacgactacacgctc
accgagccgggggtactgcccgcagccttcccgaacctgctggtcaacggcgcctcgggc
atcgccgtgggcatggcgacgaatatgccgccacacaacctgggcgaggtcgtcagtgcc
gcccgccacctcatcgagcacccggatgccacgctggaggacctcatggccttcgtgccg
ggcccggatcttcccgcgggcggcatgatcgtcggcctggacggcatccgggaggcctac
cgcacgggccgcggcaagttcctcacccgcgccaccgcccgcgtcgagaacgtgacggcc
cgcaagaagggcatcgtcgtcaccgagctcccctacttggtgggtccggagaagatcatc
gcggccatcaaggacagagtcgcctccaagaagctccagggcattaccgacgtcgccgat
ctgaccgacaggaagaacgggacccgcctggtcatcggggtcaagaacggctacaacccc
gaggcggtcctggcccagctctaccggcacacgccgctggaggactccttcggcatcaat
aacgtgtgcctcgtggacggccagccccgtaccctgggcctgcgcgaactcctcgaggtc
ttcgtgggccaccgcctcagggtggtggagcggcgcacccgcttccgcctgggcaagcgg
cgcgagcgcgcgcacctggtggacggcctgctcatcgccatcctcgacatcgatgaggtc
atcgcgctcatccgctcctcggaggacgcggccacggcgcgggagcgcttgcagcaagtc
tttgacctgtccgaggcgcaggcctcctacatcctggagttgcagctgcggcgcctgacc
aagttctccgtcatcgagttggagaaggagcgtgacgagctggcccgggagatcgaggcc
ctggaggcgatcctcgccgatgacgtcctcctgcgccgggtggtctcccgcgagttggcc
gctgtctgcgaggacttcgccacgccgcgccgcaccgtgctgctggaggcccccggcgcc
gccggcccgcgctccgccaacggcgcgggcggctcggatgggtcggcggggccggccacg
gtgggcctcatggcgggcgtcaaggcgggcgtcaaggacgtgcccttgacgatcccggac
gacccgtgccggatcctgctgtccgccacgggcctcgtggcgcgtgcggcgggggccgag
ccggtgccccgctcgggcgcgagacagccccatgacgccctggtctcccaggtggcgacg
acggcgcgcggccgcgtgggcgcggtaaccgacaccggccgcctcgtgcgccttgacgtg
gtctccgcccccgaggtcccgcgcctggagggggcgccctccctggcggggggcaccccg
gcgcggctcctagtggagatcgagcccgaggagcgcgtggtggggctcgtgccggtgggc
gacgcgggcgcgaacccgatcgtcctggccacggccgccggcgtcatcaagcgcgtcaag
gtgggcgatgagcccgccaggggcgattcctgggacgtcatctccctggccgagggcgat
tccgtggtcttcgcgggcaccgccgccgacaccgatgtgctcaccctcgtggcctcggac
gcccagctgctgcgcttcgaggcctcgaaggtgcgcccgcagggccgcgcggccgggggc
atggcggggatcagcctccacgacggcgcccgcgtggtcgcggcgtcggcggtgagcgcc
gatctgctggccgaggcggtggtggtgaccgtggccgccagcgcgggcgccctgcccgga
acgggcggcagcgtcaaagtgacgcccctggaccgttacccggccaagggccgggccacc
gggggcgtgcgcgctcagaggttcctgcgcggcgagcacgagctggtcctggcatgggtg
ggcgtgggcccggcgcgcgccgtcggctcggggggccagagcatcaccctgccgggcccc
gacgagcgccgcgacgcctccggaatcccgaccatctcgcccatcaccgccatcggctga
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