Actinomyces marmotae: HPC72_05375
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Entry
HPC72_05375 CDS
T07249
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
amam
Actinomyces marmotae
Pathway
amam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPC72_05375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amam03021
]
HPC72_05375
03400 DNA repair and recombination proteins [BR:
amam03400
]
HPC72_05375
Enzymes [BR:
amam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPC72_05375
Transcription machinery [BR:
amam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPC72_05375
DNA repair and recombination proteins [BR:
amam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPC72_05375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF612
GA_3
Motif
Other DBs
NCBI-ProteinID:
QKD79752
UniProt:
A0A6M8B1Q4
LinkDB
All DBs
Position
complement(1276357..1276758)
Genome browser
AA seq
133 aa
AA seq
DB search
MLGTSPQPEGITNPPIDDLLEKVDSKYGLVVEAAKRARQINTYTQQLESNQFEYFGPLVE
VAPEEKPLGIALREIAEDKLQVISGEEARARRAEADAARRAAEEDMFADISLDTAVTFDE
TETTGPGVDNIEF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgctcggaacctccccccagcccgagggcatcacgaacccgccgatcgacgacctcctg
gagaaggtcgactcgaagtacgggctcgtggtggaggccgccaagcgcgcccgtcagatc
aacacctacacccagcagctggagtccaaccagttcgagtacttcggcccgctcgtcgag
gtggccccggaggagaagcccctgggcatcgccctgcgtgagatcgccgaggacaagctc
caggtgatcagcggtgaggaggcccgcgcccgccgcgccgaggctgacgccgcccgccgc
gccgccgaggaggacatgttcgccgacatctcgctggacaccgcggtcaccttcgacgag
accgagacgaccggccccggcgtcgacaacatcgagttctga
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