Actinomyces marmotae: HPC72_05700
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Entry
HPC72_05700 CDS
T07249
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amam
Actinomyces marmotae
Brite
KEGG Orthology (KO) [BR:
amam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amam03016
]
HPC72_05700
Enzymes [BR:
amam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HPC72_05700
Transfer RNA biogenesis [BR:
amam03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HPC72_05700
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QKD80639
UniProt:
A0A6M8B0W2
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All DBs
Position
1355561..1356727
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AA seq
388 aa
AA seq
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MARAASEIGDGTGPIAVDAERASGFRYGQDAYLIQLRRAGAGTILVDPVSAGPLDALAAA
LDGPEWILHAADQDLPCLADVGLAPREVFDTELAARLLGREHVGLGAVIEETLGLRLAKD
HAAADWSTRPLPDSWLIYAALDVEFLTELRDALASELADAGKLEWAMQEFEAVRTRGPRA
PKVDPWRKTPRAGTAVRSQRSLAVLREIWTAREQLAVELDRTPSRILPHRAVVSAAIACP
TSRRKLFALKDFSSRQARQHSEVWWRAVERGLSLPDDELPPLRAPLAPGELPQPRSWARR
HPEAAQLLDVVRSCVRTHGERIRVPQELLLAPESQRRLAWDLGHEMARGGHPAIDSDAVS
ARLEDLDARPWQIEQCADPLSRALRRLV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ctggcccgggcggcctccgagatcggcgatggcaccggccccatcgccgtcgacgccgag
cgggcatcgggcttccgctacggccaggacgcctacctcatccagctccggcgcgcgggc
gctgggaccatcctggtcgatccggtctcagccgggcccctcgatgccctcgccgcggcg
ctggacggacccgagtggatcctgcacgcggccgaccaggaccttccctgcctggcagat
gtcggcctggccccccgggaggtcttcgacaccgaactcgcggcccgcctgctcggccgc
gaacatgtgggcctcggcgcggtcatcgaggagacgctcggcctgcggctggccaaggac
cacgcggccgccgactggtccacccgccccctgccggattcctggctcatctacgccgct
ctcgacgtcgagttcctcactgagctcagagacgccctggcctccgagctcgccgacgcg
gggaagctcgagtgggccatgcaggagttcgaggcggtgcgcactcggggcccgcgagcc
ccgaaggtcgatccctggcgcaagacgccgcgcgcgggaaccgccgtgcgctcccagcgc
tcgctggcggtgctgcgggagatatggactgcccgagagcaactcgccgtcgagctcgac
cggacgccgtcgaggatcctcccccaccgcgccgtcgtgtccgcggcaatcgcctgcccg
acctcccgccgcaagctcttcgccctcaaggacttctcctctcgccaggcccgccagcat
tccgaggtgtggtggcgggcggtggagcggggcctgagccttcccgacgacgagctcccg
ccgctgcgcgccccgctcgcgcccggcgagctgccccagccccggtcctgggcgcgccgc
caccccgaggccgcgcaactcctcgatgtcgtccgctcctgcgtgcggacgcatggagag
aggatccgcgtgccccaagaactgctcctcgcccccgagtcccagcgccggctcgcctgg
gacctcggccatgagatggcccggggcgggcaccccgcgatcgactcagacgcggtctcg
gcccgactggaggacctcgatgccaggccctggcagatcgagcaatgcgccgatcccctg
tcccgagcgctgcgccggctcgtgtag
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