Actinomyces marmotae: HPC72_08940
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Entry
HPC72_08940 CDS
T07249
Name
(GenBank) tandem-95 repeat protein
KO
K20276
large repetitive protein
Organism
amam
Actinomyces marmotae
Pathway
amam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPC72_08940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Bact_surface_Ig-like
HYR
Rep_1B
Motif
Other DBs
NCBI-ProteinID:
QKD80322
UniProt:
A0A6M8B335
LinkDB
All DBs
Position
2142191..2148265
Genome browser
AA seq
2024 aa
AA seq
DB search
MPSSIVRTLSGRIRRRGASALAALCAAALGMAAVQHQGIAQQDLDLHDNGVWVTSTSKHL
VARINASSHEADGVIRTTSSDFDVSQNGENVLVSNVSGKSVDKVDPAQVSSASVGTLPAG
TTIAQGADRVIAINSTAGTVSGALASQAGLVTSGSASHIISDSPGLLATIGTDGTIHALS
PSTGSLTTATATATSWAAPTSTTLTLSDGADAALTAVGSKPIVLERGTGILHLPGGGTID
LGETGLTLQQPGPDASSVLVASRTELISVPLDGSSPTRTPSAAKGDAAPGVAARPVRLGN
CSYAAWSSSGQFLRMCGSSSPEYIHDNALASSTTPTFRTNRDAIVLNDTTIGTVWLPDRN
LAQADEWTENSGHSSDDATPDENAKDTTQDPAQTPNRDEEHPPDAVDDSFGVRAGRTTIL
PVLANDSDPDGDVLTAVPGDVGSTATVTQVQGGLALAIKVPPDATGTLTVPYTANDGRGM
SDSAVATVTIRPDSENSAPEQQATQTLKLAEGGTDSLSVLSNWRDPDGDDLHLVSATGVG
LETRITPEGLLTVTELNGGTGPRELTLVVSDGRTTTEGKLTVDVVPAADAAPATHADHAR
GVVGQPVSISPLANDSSPTSTPLRLGSISEAPPGTTVTKDQAAGTVNFTAQKAGTYYLDY
EASDGTSLAKGLIRVDIAEASEPSAAPIVEDDTVFLAPGGSVTVNPLANDSDPAGGVLVA
VSATTPPGSGVSATVIDHSLVRISAVGEVQGKITAEYTVSNGTSTATGKITIVPLSDSTS
QAPVAVNDTAVVRVGDIVTVPVLENDSSPSGLSLKTTGKLTVPDDSLGTAWINQDKLRFK
AGQTPGTTEVSYTVEDSAGQTATATVTIEVRERDDAANAAPEPRPVTAATIAGKKALLTV
PLDQIDPDGDSATLTGLATQPTKGSVEIKGDMLVYTAFEGSSGTDSFTYTVTDHLGATAT
GTARVGIAAPTAVNTPPKTTDDLVTAKPGRKVRVDVTANDWDSDDDPVTLAGEPTSEDPA
LTAKAVNGQVALDLPEKEGNYTVHYTATDSRGGTALGTLTAQVRADAPPQAPIAADDAVT
LSDIDASGTALVDVLKNDSDPDGSPETLKVSSSDPNATVEGNSLRVAVTDHAQFILYTVT
DPDGLTGQAVVFVPAASALVPQLNRSTTPVRIPADATTSVPLASHILTRAGTSPIIGDKS
SISAGAGLSSVSAEGNGSLSVTPSPGFTGQTSVTLTVTDGTGDDALSTTLNLPILVEPKE
NRPPRFTPTALTVAPNENPVSVDLATMASDPDGDSLTYTIGPAPAGFTASLSGSTLTVGA
DATTATGTTGSLLVTVSDSKNPEVSASLPLAVSASTRPRITTTPARQTSHGEPVTVDVSG
YVSNPFPGQGITLSGSPTITSGQGSVTASGTSLTITPAAGATGDIVARYQVLDATGAADR
AATGTVTVTVASAPSAPTRVIAEPRDFSSARVTWAPGSANGSPITSYTLTEVGGAGSWSC
TGSPCYATGLTSGRSYAFEVTATNANGTSSAGRSNTVTLGPSAPGAPTGVRLQAGEGTLT
ASWTPGAAVPGTQTTYRVVFHSDSGDITRTTTGTSLTIGAADGVKAGSSYSVTVTAIASS
GGAEVGSSKSASSGSSATPYGKPGPFEITHVVQTGSGVTVYWQPANSNHAGPVSYTVSVT
GPESRTVNAGSALSTPISLSTAGTYTFRVRATTKAGSTDSLNTKGINLTLNPLPPTGLSA
SASSDVPNQISASATPQAGNGWSASDLKVEYRVNGGRWQSKKTFDGLAAGRVTVEARAYG
MQDGGEVYSESVSTSATVVGNPTDPDVRCDSLASDGTLTCSWYPSSHSGNPDDSHIKYSA
YETGGSEARLGGGKEIKGLKQSHNPLTTTVPEGESRGWCVVATNTYGFSSRDCEYKTREK
VAAQPRPAAPQPRALPINATSPYASCTVIDSANSGYSQDACWRALLDLSSFPAGSKVRCE
FNDANVWPSKGPFDTQPNSTGTAQWLGYVLTNNPKLTASCHIVE
NT seq
6075 nt
NT seq
+upstream
nt +downstream
nt
gtgccctcctccatcgtccgcaccctgagcggccggatccgacgccgcggcgccagcgcc
ctggccgccctatgcgcggcggccctgggcatggccgccgtgcagcaccagggcatcgcc
cagcaggatctcgacctccacgacaacggcgtctgggtgacctcgacgtcgaagcacctc
gtggcccgcatcaacgcctcctcccatgaggcggatggagtcattcgcacgacgtcgtcg
gacttcgacgtcagccagaacggcgagaacgtcctggtctccaacgtctccgggaaatcg
gtggacaaggtcgatccggcgcaggtctccagcgcgtcggtgggcaccctgcccgccgga
accacgatcgcccagggcgcggaccgcgtcatcgcgatcaactcgaccgctggcaccgtc
agcggcgccctggccagccaggccggcctcgtcaccagcggctcggcctcccacatcatc
tccgactcccccggcctcctggcgacgatcggcaccgacggcaccatccacgccctgtcc
ccctccaccgggtccctcaccacggcgacggcgacggccacctcctgggcggcccccacc
tcgaccacgctgacgctgtcggacggcgcggacgccgcgctcaccgccgtcggctccaag
ccgatcgtcctggagcgcggcaccggcatcctccacctgcccgggggcggcaccatcgac
ctgggggagacggggctgaccctccagcagcccgggccggacgcctccagcgtgctcgtt
gcctcgcgcacggagctcatcagcgtgcccctcgatggctcgtcgcccacgcgcaccccc
tcggcggccaagggcgacgccgccccgggagtcgccgcccgccccgtccgcctgggcaac
tgctcctacgcggcctggtcctcctccgggcagttcctgcggatgtgcggctcctcgtct
cccgagtacatccacgacaacgccctggcctcctcgaccaccccgaccttccgcaccaac
cgcgacgcgatcgtcctcaacgacacgacgatcggcaccgtgtggctgcccgaccggaac
ctcgcccaggccgacgagtggaccgagaactccgggcactccagtgacgacgccaccccg
gacgagaacgccaaggacaccacccaggaccccgcccagacgcccaaccgcgatgaggag
cacccgccggacgccgtcgacgactccttcggcgtgcgcgccgggcgcacgacgatcctc
ccggtcctggccaacgactccgaccccgacggcgatgtcctgacagccgtgccgggcgat
gtcggctcgacggcgacggtaacccaggtccagggcggcctcgccctggcgatcaaggtc
cccccggacgccaccgggacgcttaccgtgccctatacggccaacgatgggcgcggtatg
tccgactcggccgtcgccacggtgacgatccgccccgattcggagaactccgcgcccgag
cagcaggccacccagaccctcaagctcgccgagggcggcacggactccctgtccgtcctg
tctaactggcgcgaccccgacggcgatgacctgcacctggtctccgccaccggcgtcggg
ctggagacccgcatcacccccgagggactgctcaccgtcaccgagttgaacggcggcacg
gggccccgcgagttgaccctcgtcgtctccgatggccgcaccaccaccgagggcaagttg
acggtcgacgtcgtcccggcggccgacgccgcgcccgcgacccacgcggatcacgctcgc
ggcgtcgtcgggcagccggtgtccatctccccgctcgccaacgactcctcgccgacctcc
acgcccctgcgcctcggctcgatcagtgaggcgcccccgggcacgaccgtcacgaaggac
caggccgccggcactgtcaacttcaccgcccagaaagcgggcacctactacctcgactac
gaggcctccgacggcacctccctggccaaggggctcatccgcgtggacatcgccgaggcc
tcggagccctcggcggcgcccatcgtggaggacgacaccgtcttcctcgccccgggcggc
tcagtgaccgtcaatcccctggccaatgactccgatcccgccggaggagtgcttgtggcc
gtctcggccaccacgccgcccggatccggggtgagcgcgaccgtcatcgatcactccctc
gtgcggatctccgccgtcggcgaggtccagggcaagataacggccgagtacacggtctcc
aacggcacgtccacggccaccggcaagataaccatcgtgcccctgtccgactcgacctcc
caggcgccggtcgccgtcaatgacacggccgtcgtgcgcgtcggcgacattgtcaccgtg
ccggtccttgagaacgactcctccccctcgggcctgtccctgaagaccaccggcaaactc
accgtcccggacgactcgctgggcaccgcctggatcaaccaggacaagctgcgcttcaag
gccgggcagacccccggcaccacggaggtgtcctacacggtcgaggactccgccgggcag
acggccacggccacggtcaccatcgaggtgcgcgagcgagacgacgccgctaacgccgcc
ccggagccgcgcccggtgacggcggccaccatcgccggcaagaaggccttgttgacggtt
cccctggaccagatcgaccctgacggcgactccgcgaccctcaccggtctggcgacccag
cccaccaagggcagcgtcgagatcaagggcgacatgctcgtctacaccgccttcgagggc
tccagcggcaccgactccttcacctacacggtcaccgaccacctgggtgccacggccacg
ggcacggcgcgggtcggcatcgccgcccccacagccgtcaacacgccccccaagaccacc
gacgacctggtgaccgccaagcccggccgcaaggtgagggtggacgtgaccgccaacgac
tgggactccgatgatgacccggtcaccctggccggtgagcccacgagcgaggacccggcg
ctgacggcgaaggccgtgaacggccaggtcgccctagacctgcccgagaaggagggcaac
tacaccgtccactacacggccaccgactcccgcggggggaccgcgctgggcaccctcacg
gcgcaggtgcgcgccgatgccccaccgcaggcgcccatcgccgctgacgacgcggtgacg
ctgtccgatatcgacgcctcgggcacggcccttgtggacgtgctcaagaacgactcggac
cccgacgggagcccggagacgctcaaggtgtcgagctcggacccgaatgccacggtggag
ggcaattccctgcgcgtcgccgtcaccgaccacgcgcagttcatcctctacacggttacc
gaccccgacggcctcacgggccaggcggtggtcttcgtgcccgccgcctccgccctggtc
ccgcagctcaaccgctcgacgaccccggtgaggatcccggcggacgcgaccacctccgtc
ccgctggcctcccatatcctcacccgcgcgggcacctcgcccatcatcggggacaagtcc
tcgatctcggccggtgccgggctgtcctcggtcagcgcggagggcaacggctcgctgtcc
gtgacgccctccccgggcttcacggggcagacctccgtgaccctcaccgtgaccgacggg
acgggcgacgacgcgctcagcaccacgctgaacctgccgatcctggtggagccgaaggag
aaccgccctcccaggttcaccccgacggcgctgacggtcgcgcccaatgagaatcccgtc
agcgtggacctggccaccatggcctccgatcccgacggcgattccctcacctacacgatc
ggtccggcgccggccggcttcacggcctccctgtcgggctcgaccctgaccgtgggcgcg
gatgccacgacggcgaccggcacgacgggctccctgctggtgaccgtctccgatagcaag
aacccggaggtgtcggcgagcctgccactggcggtgagcgcctcgacgcgcccgcgcatc
acgacgaccccggcgaggcagacctcccacggcgagccggtgaccgtggacgtgagcggc
tacgtgtccaaccccttcccgggccagggcatcaccctgtccggatcccccacgatcacc
tcggggcagggctctgtgaccgcctcgggcacctccctgacgatcacgccggcggccggc
gccacgggtgacatcgtggcccgctaccaggtgctcgacgccacgggcgccgcggatcgc
gccgccaccggcacggtgacggtcaccgtggcctccgcgccctccgcgcccacgcgggtg
attgccgagccgcgcgacttcagctcggccagggtgacgtgggccccgggcagcgccaac
gggagccccatcacgagttacaccctcaccgaggtgggcggcgcgggctcctggagttgc
acgggcagcccgtgctacgccacgggcctgacctccggcaggtcctacgccttcgaggtg
acggccacgaacgccaacggcacctcttccgcgggccgttccaacaccgtcaccctgggg
ccgtccgcgccgggcgcccccaccggcgtgcgcctccaggccggcgaggggacgctcacc
gcctcatggaccccgggggccgccgtgccgggcacccagaccacctaccgcgtggtcttc
cactccgacagcggcgacatcacccgcacgacgaccggtacctcgctgaccatcggcgcg
gccgacggcgtgaaggcgggcagttcctactccgtgacggtcacggctatcgccagctcg
ggaggcgcggaggtcggctcctccaagagcgccagctccggttcctcagcgacgccctac
ggcaagccgggccccttcgagatcacccacgtcgtccagacgggctccggggtgacggtc
tactggcagccggccaactcgaatcacgcgggcccggtgtcctacacggtgagtgtcacg
ggcccggagtcccgcacggtcaacgcgggctccgccctgtcgaccccgatcagcctctcg
acggcggggacctacaccttccgcgtgagggcgacgacgaaggccggctcgacggactcc
ttgaacaccaagggaatcaacctcaccctgaacccgcttccccccacggggctgtccgcc
tctgcctcatcggacgtccccaaccagatctccgcctccgcgacccctcaggccggcaat
ggctggagcgcgagcgacctcaaggtcgagtaccgcgtcaacggtggccgctggcagtcc
aagaagaccttcgatggtctcgccgccggccgcgtgaccgtggaggcccgcgcctacggc
atgcaggatggcggcgaggtctactccgaatccgtatccacctccgccacggtcgtcggc
aatcccaccgacccggatgtgagatgcgattccttggccagcgatggcactctgacgtgc
tcgtggtacccctcgtcgcactctggcaaccccgatgattcgcatatcaaatattcggct
tacgagacagggggctccgaggccaggctcggtggcgggaaggagattaagggcctgaaa
cagtcgcacaaccccctgacgacgaccgttcccgagggggagagccgcggctggtgcgtc
gtggcgaccaacacctacgggttctccagcagggactgcgagtacaagacccgagaaaag
gtagctgctcagccccgccccgcggcccctcagccccgcgccctgccgatcaacgccacg
agcccgtacgcctcctgcaccgtgatcgactcggccaattccgggtactcccaggatgcc
tgctggcgcgccctcctggacttgtcgagtttccccgcggggagcaaggtcaggtgcgag
ttcaacgacgccaatgtctggccgtcaaaaggcccgttcgatacccagccgaactccacc
ggcactgcgcagtggctcggctacgtcctgacaaacaaccccaagttgaccgccagttgc
cacatagtggagtga
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