Alteromonas mediterranea U8: I634_05950
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Entry
I634_05950 CDS
T02722
Name
(GenBank) pseudouridine synthase Rlu family protein
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
amao
Alteromonas mediterranea U8
Brite
KEGG Orthology (KO) [BR:
amao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amao03009
]
I634_05950
03016 Transfer RNA biogenesis [BR:
amao03016
]
I634_05950
Enzymes [BR:
amao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
I634_05950
5.4.99.29 23S rRNA pseudouridine746 synthase
I634_05950
Ribosome biogenesis [BR:
amao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I634_05950
Transfer RNA biogenesis [BR:
amao03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
I634_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Fe_hyd_SSU
Motif
Other DBs
NCBI-ProteinID:
AGP92916
LinkDB
All DBs
Position
complement(1353096..1353935)
Genome browser
AA seq
279 aa
AA seq
DB search
MQPIPILFEDANLLVVNKPVGVAMHDALDSKLGAPKDNALAIVHEDTDKNAAQKESSACK
GEDTLRTDGIVTQLKKQLSLSELHLCHRLDTGTSGCLCLAKNAKTAAEIGELFSSRRIGK
FYLALSEHKPKKKQGAIIGDMKNRRGGQRILLKSQENPAITQLFSHAAKPGTRGFIVKPH
SGKTHQIRVALKSIGAPILGDSLYGGAPSDRLYLHAWHLRLPLSAGELTITAPFDTGRVV
NESEVQAWYSALQQPDSYPWPSLPARFSTPPIDKLNVLG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacccatacctattctttttgaagacgcaaacttacttgtagtaaataagcctgtt
ggcgttgcgatgcacgacgccctagacagcaagctaggtgccccgaaagataacgcgcta
gctatcgtgcatgaagacaccgacaaaaatgctgcacaaaaagaaagctcagcttgcaaa
ggcgaagatacgctgcgtactgatggtattgtcacccagcttaaaaagcagcttagcctt
agcgaactgcatttatgccaccggttagatacgggaacatcgggctgcttgtgtttggcg
aagaatgcaaaaacagcggctgaaattggcgagctgttttcttcacgacgcatcggtaaa
ttttatttggccttaagtgaacacaagcctaagaagaaacaaggtgcaatcatcggcgat
atgaaaaaccgtcgtggcggtcagcgcatcttgttaaagtcgcaggaaaaccccgctatt
acccagttattcagccatgccgctaaaccgggcacacgaggctttattgttaaaccccat
tcaggcaaaacacaccaaatccgcgtggcattaaaaagtattggcgcccccattttaggc
gacagtctatacggtggtgcgccctccgacagactttaccttcacgcatggcacttgcgc
ctgcctttatctgccggagagcttaccatcactgcgcctttcgataccggtcgcgtggtc
aatgaatcagaagtacaggcttggtatagcgctcttcaacagccagatagctacccttgg
ccatcgctgccagcccggttttcaactccccctattgataaattaaacgtgttaggttaa
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