Alteromonas mediterranea U8: I634_09980
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Entry
I634_09980 CDS
T02722
Name
(GenBank) transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
amao
Alteromonas mediterranea U8
Brite
KEGG Orthology (KO) [BR:
amao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amao03000
]
I634_09980
Transcription factors [BR:
amao03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I634_09980
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AGP93709
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Position
2273732..2274616
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AA seq
294 aa
AA seq
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MDVSYRQVKAFVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFKRNTRNVSLT
PEGEVLFPNALRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPSILSAFHKRTP
NVNLRIVDVVMEQVIHEVTTGRSEIGFSFEPERKDGLVFKSLFADQFVVVANSSQAKYLS
NAPSWQDCLLHPLVMMNRGSAVRHWTQSQLARFGELNIIAETGQLSTLGKLIQNGLGISI
MPAICQSQMEGLGLVVRQITINPLIKNIGIIKHARKGLSLPAQSMWDLAIAHYA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtatcctaccgacaagtgaaagcgtttgtagaagtggcgaaatcttcgacattt
gctgaagctgcagttaatttacaccttactcagccagcactgtcttctgccattaagaaa
atggaagagcaattgggcggcaaactctttaagcgtaatacgcgtaatgtaagcctgaca
ccggaaggtgaagtgttattcccaaatgccttacgactgcttcacgattgggataacacg
ttttcagacatacagaacttgtttgccatggccaaaggtcagctgaccatttgcgcaatg
ccctcatttgcagagtcacatttacccagtattctatctgcttttcacaagagaacgcca
aacgtcaacttgcgtatcgtcgatgtagtgatggagcaagttattcacgaagtcactaca
ggtcgaagtgaaatagggttttccttcgagccagagcgaaaagatgggctagtgtttaaa
agtctgtttgctgaccagtttgttgtagtggctaattcttctcaggccaagtatttaagc
aacgcgccaagctggcaagactgcttgctgcaccctctggtaatgatgaacagaggctcc
gcggttcggcattggacacaatctcaattagcgcgttttggtgaattgaacattattgcc
gaaacgggtcagctatcaacgcttggcaaattaattcaaaatgggttgggcatttcaatt
atgccggctatttgccaatctcaaatggaggggttagggctggtagtgagacaaataaca
atcaacccgttgataaaaaatatcggtattataaagcatgcgcgaaagggtttgtcgcta
cctgctcaatctatgtgggacttagctatcgcgcattacgcttaa
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