Alteromonas mediterranea U8: I634_10230
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Entry
I634_10230 CDS
T02722
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amao
Alteromonas mediterranea U8
Brite
KEGG Orthology (KO) [BR:
amao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amao03400
]
I634_10230
Enzymes [BR:
amao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
I634_10230
DNA repair and recombination proteins [BR:
amao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
I634_10230
Prokaryotic type
I634_10230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
NXPE4_C
Motif
Other DBs
NCBI-ProteinID:
AGP93757
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All DBs
Position
complement(2340736..2341734)
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AA seq
332 aa
AA seq
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MLSDNTKPPITIIWLKRDLRLRDHEPLFRAVASNERILLLYCWEPSLIEEPHMSVRHWHF
IQQSIDDINGQLPEHVNVLTLHMEAVDALAFISRFYTINAVRSYQEIGLKVTYNRDLRVA
NHLNNRRIPFLEAKCGAVIRGLPHRAQWKANWEEYFAESTYDYDLKRANWVKWNVHVDIQ
KASLTLSEVSALYAAKKYINKDYLSKYCGVLSEDGLIDFSAMQPGGERRAWQVLKDFFND
RGQYYHQHISKPEYARRACSRLSPYLAWGNISIKQVYQSVQRQKHKKRALPIHEKKRWSR
ALSALTSRLHWHCHFMDPRGHLNENLRDAFTF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcgacaacactaaaccgcctattacaataatatggttaaagcgagatcttcgc
ttgcgagaccatgaacccctttttcgtgctgtcgcatctaatgaacgtattctcttactt
tattgctgggaaccgtcattaatagaagaaccgcacatgagcgtgcgtcactggcacttt
attcagcaaagtatcgacgatataaatggtcaactgccagaacatgtcaacgtactaacg
ctgcatatggaggccgttgatgccctagcctttatttcacggttttacacgattaacgcg
gttagaagttaccaggaaataggtttaaaggttacgtataaccgtgacttacgggtcgct
aaccatttgaataataggcgcatcccctttttggaagcaaaatgtggcgcggtaataaga
ggattgcctcatcgagcgcagtggaaagctaactgggaggagtattttgctgaaagcacc
tatgattacgacctaaagcgtgcaaattgggttaaatggaatgtgcatgttgatatacaa
aaagcgtcgctaacactgagtgaggtttccgctttatatgcggcaaaaaaatatataaat
aaggattacctgtcaaaatactgtggcgttttatccgaagacggccttatagattttagc
gcaatgcagcccggtggcgaacggcgagcgtggcaagtacttaaggacttttttaatgat
cgcggtcagtactatcaccaacacatttctaagcccgagtacgcaaggcgtgcttgttct
cgtttgagcccataccttgcttggggcaatatctcgattaagcaagtgtatcaaagtgta
cagcgccaaaaacataagaaacgagcgttgccaatacacgagaaaaagcgctggagccgt
gccctgtccgcgttaacatcaaggttacactggcattgccactttatggacccgcggggg
catttgaacgagaacctacgtgatgcttttaccttttaa
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