Anopheles maculipalpis: 126556816
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Entry
126556816 CDS
T10890
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
amap Anopheles maculipalpis
Pathway
amap03020
RNA polymerase
amap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126556816
09124 Replication and repair
03420 Nucleotide excision repair
126556816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amap03021
]
126556816
03400 DNA repair and recombination proteins [BR:
amap03400
]
126556816
Enzymes [BR:
amap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126556816
Transcription machinery [BR:
amap03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126556816
DNA repair and recombination proteins [BR:
amap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126556816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
126556816
NCBI-ProteinID:
XP_050068292
LinkDB
All DBs
Position
2RL:complement(50900814..50904681)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYENEEDHFEEEDPEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIELTAEAQHSSGEIENPTRYLLKFDQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTKLVEGQDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRVIAILPYVKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLRKNHIDMLKDRDYNNYGWQVLVASG
VVEYIDTLEEETVMIAMTPYDLKQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPNRQTCQG
MRNALYDKLDEDGIIAPGLRVSGDDVVIGKTITLPETDDDLDGTTKRYTKRDGSTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GITPDIIINPHAIPSRMTIGHLIECIQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVKLPYAAKLLFQELMAMNIAPRLMVL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagaatgaagaagatcatttcgaggaggaagatccggaggagatttctcacgaa
ttgtggcaggaagcatgttggatcgttatcaacgcatacttcgatgagaagggtctggtg
cggcagcagctggacagctttgacgagtttatccaaatgtcggtccaacggatcgtggaa
gattcgccggccatcgagctgacggcggaagcgcagcattcgtcgggtgagatcgaaaat
cccacacggtacctactgaagttcgaccagatctatctatcgaaaccgacgcattgggaa
aaggatggttccccatcgcccatgatgccgaacgaagcacgtctccgcaatttgacctac
tcggccccactgtatgtggacattaccaagacaaagctggtcgaggggcaggatccggtc
gagacgcagcatcagaaaacgttcatcgggaagattccgatcatgttgcgctccacgtac
tgtctgttgtctcagctaacggatcgtgatttgaccgagctgaacgagtgtccactcgat
ccgggcggttactttattatcaacggttcggaaaaggtgctgatcgcacaggaaaagatg
gccaccaatacagtatacgtgttcagcatgaaggatggtaaatacgcatataagacggag
attcgttcctgtctggagcatagctctcggcccacctcgacactctgggttaacatgatg
gccaggggtggtcagagcataaaaaagtcggcgattgggcagcgtgtgatagcaatcctg
ccgtacgtgaagcaagaaattccaatcatgatcgtgttccgtgcgctcgggttcgtcgcc
gatcgtgacatcctcgagcacattatctacgattttgacgatccggaaatgatggagatg
gtaaaaccttcgctcgacgaagcgttcgtcgtgcaggaacagaatgtggcacttaacttt
atcggtgcacgcggtgcccgacccggtgtcacgaaggacaagcgtatcaagtacgcaaag
gaaatcctacagaaggaaatgttgccccacgtcggtgtgtccgatttttgtgaaacgaaa
aaagcttacttcctcggttacatggtgcatcggttgctgctggctgcgcttggtcgtcgc
gagctggacgatcgtgatcactatggcaacaagcgattggatctagccggtccactgttg
gcatttttgttccgtgggctttttaaaaatctgatgaaagaggtacgaatgtacgcacag
aagtttattgaccgcgggaaagactttaacctcgagttggcgatcaagacaaaaattatt
acggatggattgcgatactcgttggccaccggaaactggggcgaccagaagaaagctcat
caagctcgggccggtgtatcacaggtcttgaaccggctaacgtttgcttctacgttgagc
catttgcgacgcgttaattcaccgatcggacgtgacggtaagctggcaaagccacgtcag
ctgcacaacaccctgtggggcatgatatgtccggccgaaacgcccgagggtgcggctgtc
ggattggtgaagaatttggcactgatggcttacatttccgtcggttcgcaaccgtcaccc
attctggagttcttggaagagtggtcgatggaaaatttggaagaaattgcaccatcggcg
attgccgatgcaacgaaaatcttcgtgaacgggtgctgggttggcattcatcgtgatccg
gaacagttgatggcaacgcttagaaagcttcgccgacagatggatattatcgtgtcggaa
gtatccatgattcgggacattcgtgatcgcgaaattcgtatctacaccgacgcggggcgt
atctgtaggccactactgatcgtggaaaatggatcgcttctgttgcgtaaaaatcacatt
gacatgctgaaagaccgtgactacaataactacggatggcaggtgctggtggcgtccggt
gtggtcgagtacatcgatacgctcgaggaagaaacggtcatgattgcgatgacaccgtac
gatctaaagcaggacaaggaatacgcgtactgtacgacgtacacgcattgcgagatccat
ccggcaatgatattgggcgtttgtgcctccattattccgttccccgatcataatcagagc
ccgcgtaatacgtaccagagcgctatggggaagcaggcgatgggtgtgtacatcaccaat
ttccatgtgcggatggacacactggcccacgtgctttactatccgatgaaaccgctcgta
acgacacgctcgatggagtaccttcggttccgtgagttgccggccggtattaactcgatc
gtggccattctctgctacaccggctacaaccaggaggacagtgttattctcaacgcatcg
gctgtcgagcgtggattcttccggtcggtcttctatcgatcatacaaagattcggaaagc
aagcgtatcggcgatcaggaggagcagttcgagaagcctaaccgacagacgtgtcagggc
atgcggaacgccctgtacgacaagctggacgaggacggcattattgcgcccggattgcgt
gtgtccggtgatgatgtggtgattggcaagacaatcacactgcccgaaacggacgacgat
ctggatggtacgacgaaacggtacaccaagcgagatggttcgacctttttgcgaaactcc
gaaaccggtatcgtcgatcaggtaatgctgacattaaacagcgagggctacaagttctgc
aaaatccgtgtgcgttccgtgcgcattccgcagattggagataagtttgcctcgcgccac
ggacaaaaaggtacgtgcggtattcagtaccgccaggaggatatgccattcacctgcgag
ggtattacgccggacattattatcaacccgcacgctatcccgtcgcgtatgacaattggg
catttaatcgaatgcatccagggaaagctgggctcgaacaagggtgaaattggtgacgcg
acaccgttcaacgatgcggtaaacgtgcaaaagatatccaccttcctgcaggagtacggt
taccatctgcgtggcaacgaggtcatgtacaatgggcacacggggcgtaagatcaatgca
caggttttcctcggtcctacgtactaccagcgtttgaagcatatggtggatgacaagatt
cactcgcgtgcccgtggcccggtgcagatactagtgagacagccgatggagggtcgtgcc
agggatggtgggcttcgtttcggtgagatggaacgtgattgtcaaatttcacacggagcg
gcacagtttttgcgcgaacgtctgtttgaggtatccgatccgtaccgaattcacgtgtgt
aacttctgtggactgatcgcgatcgctaatctgaggaacaatacattcgagtgcaagggt
tgcaaaaacaagactcagatatctcaggtgaaactaccatacgcggcaaaactcctattc
caagagctgatggcaatgaatattgctcctcgtttgatggtactctaa
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integrated database retrieval system
