Anopheles maculipalpis: 126557645
Help
Entry
126557645 CDS
T10890
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
amap Anopheles maculipalpis
Pathway
amap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126557645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amap03019
]
126557645
Enzymes [BR:
amap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
126557645
Messenger RNA biogenesis [BR:
amap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126557645
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126557645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_14
LRR_8
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
126557645
NCBI-ProteinID:
XP_050069452
LinkDB
All DBs
Position
2RL:54423351..54526613
Genome browser
AA seq
548 aa
AA seq
DB search
MSRNKDKYESNNPRRQQTFLTAEDIAAGKKTCWHGIEITGSVRNLSPTLWKFEHLTALFL
NDNCLTRLPHQIGQLANLRTLDLSANKLRSLPAELGELIQLRELLLNNNYLRVLPYELGK
LFNLHVLGLHGNPLGKDVLSIYNEPNGTSKLLMYMLDNLSVTVAPPPQRPWIPLARPNRN
RGACIFTVMCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYAADIISLQEVET
DQFFNFFKPELKNDGYEGIFSPKSRAKTMSEADRKYVDGCAIFFRSAKFTLIKEHLVEFN
QLAMANAEGSDNMLNRVMPKDNIGLAALLKVKESAWESVSPEAAQISQPILVCTAHIHWD
PEFCDVKLIQTMMLSNELKTILDEAGLSFRPGHKFDVNNVQLVLCGDFNSLPDSGVIEFL
SAGRVSMDHQDFKELGYKSCLQRISNCDTPNEFTHSFKLASAYSEDIMPYTNYTFEFKGI
IDYIFYSKQGMVPLGLLGPISTEWLRENKVVGCPHPHIPSDHFPLLVELELIHMPTTGAQ
PNGLIGRR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcaataaagacaagtacgaaagcaacaacccccggaggcagcaaacatttctg
accgccgaggacattgccgccgggaagaagacgtgctggcacggcatcgagataacgggc
agcgtgcgcaaccttagcccgacgctctggaagtttgagcatctgactgcactgttcctg
aacgataactgtctgacgcgcttgccgcatcaaattggtcagctggccaacctgcggacg
ctcgatctatccgcgaacaagttgcgcagtttaccggccgagctgggtgagctcatacaa
ctacgggaattactgctgaacaataattatctgcgagtgcttccgtacgagcttggcaag
ctgttcaatctgcatgtgctcggattgcacggcaatccactcggcaaggatgtgctgtcg
atctacaacgaaccgaacgggacgtccaaattgctgatgtacatgctggataatctgtca
gttacggtagctccaccacctcagcggccctggatccctctagctagacccaatcgcaac
cgaggcgcatgcatattcacggtcatgtgctacaacgtgttgtgcgataagtacgcgacg
agacagatgtacggctactgtcctagctgggcgctaagctgggagtacaggaaaaaggcc
attcttgacgagatacgacattacgcggcggacatcatcagcctgcaggaggtcgaaacc
gaccaatttttcaacttcttcaagccggagctgaagaatgatggctacgaaggtatcttt
tcgcctaaatcgcgagctaaaacaatgtctgaagcggatcgaaagtacgtcgacgggtgt
gcgatcttcttccgctctgcaaagtttacgctcatcaaggagcatctggtcgaattcaat
cagctcgcgatggctaacgcggaaggttccgacaacatgctcaatcgcgtaatgccgaag
gacaacatcggacttgcagcattgctgaaggtaaaggaaagtgcgtgggaaagcgtttcg
ccagaagcggcccaaatttcgcaaccgatcctggtgtgcaccgcgcacatccactgggat
ccggagttttgcgacgtgaagcttatccagacgatgatgctgagcaacgagctgaagaca
atactggacgaggcggggctgagcttccggccgggccacaagttcgatgtaaataacgtg
cagctggtgctgtgtggtgactttaactcgcttccagactcgggtgtgattgaatttcta
agtgccgggcgtgtatcaatggaccatcaagatttcaaggagctgggctacaaatcctgc
ctgcagcgtatatcaaattgtgatacaccaaatgaatttactcattcctttaaactagcg
tcagcgtacagtgaagatataatgccatatacaaattatacattcgaatttaaaggtatt
atcgattacatattctactcgaagcagggcatggtgccgctcgggctgctcggtccgatc
tcgaccgaatggctgcgggagaacaaggtggtcggttgtccccatccgcacataccttcc
gaccacttcccgctgctagtcgagctcgagctaattcatatgccgacgacgggcgcccaa
ccgaacgggctgatcggtcgaaggtag
DBGET
integrated database retrieval system
