Anopheles maculipalpis: 126559704
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Entry
126559704 CDS
T10890
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
amap Anopheles maculipalpis
Pathway
amap03008
Ribosome biogenesis in eukaryotes
amap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126559704
09123 Folding, sorting and degradation
03018 RNA degradation
126559704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amap03021
]
126559704
03019 Messenger RNA biogenesis [BR:
amap03019
]
126559704
03009 Ribosome biogenesis [BR:
amap03009
]
126559704
03016 Transfer RNA biogenesis [BR:
amap03016
]
126559704
Transcription machinery [BR:
amap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126559704
Messenger RNA biogenesis [BR:
amap03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
126559704
Ribosome biogenesis [BR:
amap03009
]
Eukaryotic type
Pre-60S particles
RNases
126559704
Transfer RNA biogenesis [BR:
amap03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
126559704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
DUF4335
Motif
Other DBs
NCBI-GeneID:
126559704
NCBI-ProteinID:
XP_050071832
LinkDB
All DBs
Position
2RL:23028698..23037988
Genome browser
AA seq
1056 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIIECVEQKTVDDQGNVVYENMSAPNPNRVEFDNLYLDMNGIIH
PCTHPEDKPAPRNEDEMMIAIFECIDRLMNIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR
ASKETAEKAAEVARIREELAAKGAILPPEKEKGSHFDSNCITPGTPFMDRLSKCLQYYVH
DRMNNNPGWKNLKVILSDANVPGEGEHKIMDYIRKQRVQPDYDPNTHHVLCGADADLIML
GLATHETHFTIIREEFLPNKDRPCDICQQMGHEMKSCAGLQSERELANRTPPAPGKETQY
IFVRLNVLKEYLQKELDMPNLPFAYDFERVLDDWVFMCFFVGNDFLPHLPSLEIRENAID
RLVTLYKKCVYKTQGYLTDSGSVLLERVEMIMTDLGYAEDEIFRQRKVSEDRFKERNKRM
RLQKEREQRPNFQHINNSQFAPTPLGRGVQPQAIVNPRQEAAHFRMLGQGGKAKDEAATA
TDTGADQQGPRGVKRKPEEPLAVTVADDEEKETPDEVRLWEDGFKDRYYESKFDVMPQNI
KFRQTVAWEYVRGLCWVLQYYYQGCASWEWYFPYHYAPFASDLKHLENVDTHFDRGTPFK
PLQQLMGVFPAASRSHVPPAFAELMVDPRSPIIDFYPIDFRIDLNGKKFAWQGVALLPFV
DEKRLFKATDPKVPLLTVEERLRNENGDAKLFVLPGSAGYKTLAGLYVGEDVDYEREMPV
TVDHLQGFIIPTKENVPREGMLPSPIPGLAAVTENQVLTVRFQDPKFADGFVFPARKLEN
AKDQPKVLGANDGPVIGFGQRNDRASLGSSGHRMLNNRLGLGYGGGAGGGRGGYGNNNDD
GGRRNNNYQGGYNNNNNRNNGRGGGSHNNYNSGYNNNDGNSTYSTGGQYNRQQGGQQRRQ
GNGDESADNVTASAPSGSATGNRSVFEQLSSQIQQYQQQMMNEISRNTSTPSQSTTGASN
LLPNPFANQVQYDYNNHRSNSSWTNNNGGRNNNNRGGRGGGGGGGGGRQFHGGGGGGGNH
RNNNNNNNRYGQNNYGSGGGGGGGGNNRFNNQRRQY
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcatttttccgctggttgtcgcgaaaatacccgtccgtgataatcgaa
tgcgtcgagcagaagaccgtagacgatcagggaaatgttgtttacgaaaacatgtccgct
cctaacccgaacagggttgagtttgataatttgtacctcgatatgaacggtattattcac
ccttgtacacatccggaagataaaccggctccacgaaacgaggatgagatgatgatcgct
atcttcgagtgtatcgatcgactgatgaacattgtccggccacggaaggtcctgtacatg
gccatcgatggtgttgcgcctcgtgcaaaaatgaatcagcagcggtctcgtcgtttccgg
gcctcgaaggagacggctgaaaaagcggccgaagtggcccgtatccgtgaggagctagca
gccaagggtgcgattctgccgccggaaaaggaaaagggaagtcatttcgattcgaactgc
attacgcccggcacaccgttcatggaccggctaagcaagtgtctgcaatattacgtacac
gaccggatgaacaacaatccgggatggaagaatttgaaggtgatcttgtccgatgcgaac
gtgcccggtgaaggtgagcacaaaattatggactacatacggaagcagcgcgtacagccg
gattacgatccgaacacgcaccatgtgctgtgtggtgccgatgcggatctgatcatgttg
gggctggcaacgcacgaaacgcatttcaccatcatccgggaagagtttctcccgaacaaa
gatcgaccgtgcgacatttgtcagcagatgggacatgaaatgaagtcgtgcgcagggtta
cagtcggagcgtgaactggccaaccggacaccgcccgcaccgggcaaggaaacgcagtac
atcttcgtgcggctgaacgtgctgaaggagtacctgcagaaggagctcgacatgcccaac
ctgccgtttgcgtacgattttgagcgcgtgctggacgattgggtgtttatgtgctttttc
gtcggtaacgatttcctgccccatctgcccagcttggaaattcgcgagaatgcgatcgat
cggctggtgacgctgtacaaaaagtgtgtgtacaaaacgcagggctatctgaccgattcg
ggcagcgtcctgctcgagcgggtcgaaatgatcatgaccgatctagggtacgcggaggat
gaaatctttcgccagcggaaggtgagcgaagatcgcttcaaggagcgtaacaagcggatg
cgcctgcagaaggaacgcgaacagcggcccaactttcagcacatcaacaattcgcagttc
gcaccgactccgcttggacgtggtgtgcagccgcaggcgatagtaaatccgcgtcaggaa
gcggcccactttcgtatgcttgggcagggtgggaaggctaaggatgaggcggcgaccgcg
actgacaccggtgccgatcagcaaggtccacgaggcgtcaaacgcaaaccggaagaaccg
ctcgccgtgacggttgccgacgacgaggaaaaggaaacaccggacgaggtgcggctttgg
gaagacggttttaaggaccggtactacgaatccaagtttgacgttatgccacagaacata
aaattccgtcaaacggttgcctgggagtacgtgcgtggactttgctgggtattgcagtat
tactatcagggctgtgcatcctgggaatggtattttccgtaccattatgcaccgtttgcc
tcggacctaaagcatctggagaacgtcgatactcacttcgaccggggaacacccttcaaa
ccgctacagcagttgatgggtgtattcccggctgctagccgtagccacgtgccgccagca
ttcgccgagctgatggtcgatccgcgcagtcccattatcgacttttatccgatcgatttc
cgcatcgatctgaatgggaaaaagtttgcctggcagggtgtcgccctgctaccgttcgtc
gacgagaagcggctattcaaagcaacggatccaaaagtaccattgctaacggtagaggaa
cgactgcgaaatgaaaatggcgatgcgaaactattcgtactgcctggttcggctggatat
aaaacgctggccggattgtacgtcggtgaggacgtagattacgagcgcgagatgccggta
acggtcgatcatctgcaaggttttattattccgacgaaggaaaatgtaccccgagagggt
atgcttccttcacccattccgggactggcggcagtgacagaaaatcaggtcctaacggtc
cgcttccaggatcctaagtttgcggacgggtttgtgtttccggcccggaagctggagaat
gcgaaggatcaaccgaaagtgctcggtgcgaacgatggtccggtgattgggttcggacag
cggaacgatcgagcgtccctaggatcttcgggacatcgtatgctgaacaatcgtcttgga
ctagggtacggtggtggagctggtggtggcagaggtggatatggtaataacaatgatgat
ggcggcagaaggaacaacaattaccaaggaggttataacaataacaacaaccgcaacaat
ggacgtggaggaggttcccacaacaactacaactccggatacaataacaatgacggtaac
agtacctatagcaccggtggccagtacaatcgccagcagggaggtcagcaacgtcgccaa
gggaatggcgatgagtcggctgataatgttacagcatccgcgccttccggatcggccacc
ggcaatcggagcgtgttcgagcagcttagcagtcagatacagcagtaccagcagcagatg
atgaacgaaatttcgcgcaatacctctacgccgtcccagtcgacgaccggggcctcgaac
ctgctgccaaacccgttcgccaatcaggtccagtacgattacaacaatcatcgtagcaat
agcagctggacaaacaacaatggtggacggaataataataaccgtggaggtcgtggcggc
ggcggcggcggcggtggtggaagacagtttcatggtggtggtggtggtggaggtaaccat
aggaacaacaataacaacaataaccgctacggacagaacaattatggttccggtggtggt
ggtggtgggggcggaaataatcggtttaacaatcagcggagacagtactaa
DBGET
integrated database retrieval system
