Anopheles maculipalpis: 126561325
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Entry
126561325 CDS
T10890
Name
(RefSeq) uncharacterized protein LOC126561325
KO
K12597
protein AIR1/2
Organism
amap Anopheles maculipalpis
Pathway
amap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126561325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amap03019
]
126561325
03016 Transfer RNA biogenesis [BR:
amap03016
]
126561325
Messenger RNA biogenesis [BR:
amap03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
126561325
Transfer RNA biogenesis [BR:
amap03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
126561325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC_4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
126561325
NCBI-ProteinID:
XP_050073356
LinkDB
All DBs
Position
3RL:complement(68382693..68388745)
Genome browser
AA seq
1702 aa
AA seq
DB search
MEDRDLAALEERLYSSIHHSYEDETPAKVADATPFPAPATRIVSRMAVVNNSQGMLSANT
KRYWAGPAAPEDRAGERAPCAQNSLTNGVPKPSAPGVNVSETVRDGGGIDIRKMFLAPYQ
SLLGNNDGKVSENQSPSLPDDASLHQNVPERVSTTKQATKEPALQLKKKKQTKQAGQYVG
KRLASLLKLVDKDRKENAMQVLESKKTKANRVRQRKRAPVVVAEICINSSDEESQPVKSK
IELDAPLSLSDEETDEVIIIPTPPPPQICIDCSDEEEPSSTNSSSQFALPKTKKQKLTPA
TSSRCHSPSNSSIMSDDFIGQHDRSRLNDSFTESIPSDDELANTMEGNRRIGTSGKPAKE
TMEVRLERVPSISSIDTVCTNGDTTDQEKRPQETGKTGTAKSQPQANGIGAATNTKSKKD
STTTKKTPSKGKLSKPAPASSTVVEAANSPCTTTKGNANSKPSSGTISTDSSPKTPGKSK
TKSISLVMELVRKQFESKKTRSDGSGKKAKSKKDASTTASPSDKPTNEYAEKDTVGKGGS
AGAKSKSKKIRLFEENVSSESDYDILRKDAAASATTPQEPDKRSRRSALTFIEQAADVSS
ESDYDESFLQTKKNVAEKQTVEREPKKRIGRKRKQYNSETYSDEDFACLLTDIVRAVSDT
EEDEDDEDDVTGIAENNAAVTKTVPAEMTETVTAATSIPNPVNNDTAGEEQPATSKLDRN
PKKKRKVKDVPPVGTAEDGKVITTPPPDTTQMEEQPDPGSKKKKKAKEPKSTVKDIAADS
SAPETQTTGTAEPVAPPSTVKRKKKQTTTAASVPTTSDDIQTIVDSDDEDIQLVVNTPRE
SARKTPTLGPDCAWNEEMKEFYNTSWAGENMDLEMVLRKMPYHTRQWHIVHRDRFPEPPR
KEITCTNCGERGHVKIRCRNVPKLAICYMCGEKGHKEPRCPKTICLNCGAKTRSFVRGCK
SCSREADVLCFLCGVRGHTQRSCPDLWRRYHSTTEDNVPLKEDFEKNPKARWCSICCRFG
HQAHTCNDARRIFGHPIPNVNVSSYMPAYRGEYNRYSKHQNDEQERRLAENPTARYNLFS
EDANVCEFNLPEMAQNEKGFYFNFLRSTGLLEKHEQFNREQEEAKMLEQRQQQELMQPPV
PQTAMESTPPQNPPVVQIKEDPQPVMEQSATVAEPCQQEPTTSKIMPAGNNVPVVEENSN
YSFSEFQTDTSTDMHNSFDNVHQHVEEEKSPPPADNLATIENNTDHWLSDYIPLTVADPV
AATTSTPSPELPQMTAPAPNLPLARASEPDEIAPTAVAENAKVLLSKEHATLLLSEKGAE
FLSSTGKQHCVQLSILFESVGNVLLITGTPDAQNAFHERLVQYLREMEEVTRNSKYFQNV
VPRNFGKMSRYIAGYLRFLVREKDSMRHLLTQLNHSKNPETQEKCRRRLNTTLFGVYGLR
DGRMHLNILRNQLALCKKAIPQKGELEEYQRVIISDAIRYIFSGYDHKNYDAVVEEFELL
KRTNKLDILTFYDLGLSRIIKHPQTSEMPAEKPPSKGKKNKNAAKPNVEVVLSRKAKKQM
KEMMAAAQRNESITEGNVHNSNTTVGGNDFIMNTTTTAPFPTIDPVRLQQLDNSTRYVHH
SSQERENVAYAHYSKNWPNREWGRYGSPRDDRVRYHWYRQSDPENQRQQQSAADLSRLAV
RANTLRDQELNQLQRLQDMLRR
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcgggatttggccgcgcttgaagaacgattatactcctccatccaccactcc
tacgaggatgaaacgccggcaaaggtcgctgatgcaacaccgttccctgctccagccact
cgcattgtttcacgcatggcggttgttaacaatagccaagggatgctatcagcaaacacg
aaacggtattgggccggtcctgccgctccggaggaccgtgccggagaacgagcaccgtgc
gctcaaaacagtttaactaatggtgtgccaaaaccatccgcacctggagtgaatgtgtcg
gaaaccgtcagagatggtggtggaatcgatataagaaagatgttcctagccccgtaccaa
tcactgctcggaaacaacgatggtaaagttagcgaaaatcaatcaccatcacttccggac
gatgctagcctgcatcagaacgttccagagcgtgtatctacaacaaaacaagcaactaaa
gaaccagcgctgcagttgaagaagaaaaaacaaaccaaacaggccggacagtatgtgggg
aaaaggttagcaagcctgctgaagctagtagacaaggataggaaagagaatgccatgcaa
gtgttggagtcgaaaaaaacaaaggcaaaccgtgtgcgacaacgtaaacgggccccagtg
gttgtggcagaaatatgcatcaattcgtctgacgaagaatcacagcctgtaaaatcgaag
attgaactcgatgcgccgctttcgctatccgatgaggaaacggatgaggtcatcatcata
ccaacaccaccaccgccacaaatctgtattgattgcagtgacgaagaagaaccgagcagc
accaacagcagcagtcaatttgccttaccaaaaacaaagaagcagaaactcacacccgct
acctcatcacgctgccacagcccatcgaacagttcgataatgtcggatgattttatcggt
cagcacgatcgatcgaggttaaatgatagctttaccgaaagtattccgagcgacgatgag
ctggcaaatacaatggaaggaaatcgtcgcatcggaacgtccggtaaaccggctaaggaa
acgatggaagtgcgattagaaagagttccatccatctcatcgatagatacggtttgtacc
aatggggataccaccgatcaggaaaaacgcccacaagagactggcaaaactggtacagcc
aaatcccaaccccaggcgaatgggatcggagcagcaacgaatacaaaaagtaaaaaggat
tctacaaccactaagaagacaccttccaaagggaagctttcgaaaccggcaccggcctct
tcgacggtcgtcgaggcagcaaactcaccatgcaccacgaccaaaggaaatgcaaacagc
aaaccaagctccggaacaatatcaacggactcttcgccaaaaacgcccggtaaatcaaaa
acaaaaagcatatcgcttgtgatggagctcgtccgcaagcagttcgaatcgaaaaagaca
cgttcggacggttcgggcaaaaaggcgaaatcgaaaaaggacgcatcgaccaccgcttcg
ccgtcggacaaaccgacaaacgaatacgcggaaaaggatacagtgggcaagggtggcagc
gcaggagcaaagtccaaatcgaaaaagattagactcttcgaagagaatgtatcctcggaa
agtgattacgacattttgcgtaaggatgctgcagcaagcgctaccacaccacaggaaccg
gataaacgatcgagacgttcggcgttaacgttcattgagcaggcggccgatgtgtcgtcc
gaaagtgattacgatgaaagctttttgcagacgaaaaaaaacgtcgccgaaaagcaaacg
gtcgagagggaaccgaaaaaacggatcggccgtaagcgaaagcagtacaactcggaaacg
tactcggatgaagattttgcctgcctgctgacggacattgtgcgagcagtatcggacaca
gaggaggacgaagacgatgaggatgacgttactggaattgcagaaaataatgctgctgtc
acaaagacagtgccagcagaaatgacagagacagtaacagcagcaacatccataccaaac
ccagtgaacaacgacactgccggcgaagaacagccagcaacatctaaactggaccgtaat
ccgaagaaaaagagaaaggtaaaagatgtgccaccggtaggaacagcagaagatggcaaa
gtgatcacaacaccaccacccgatacgacgcagatggaggagcagccggatccaggttca
aagaagaagaaaaaggcgaaggaaccaaaatcaaccgttaaggatatcgcagcagacagt
agcgcaccggaaactcaaaccaccggtacagcggaacctgtagcaccgccttcgactgta
aaaagaaagaagaagcaaacaactacagcggcaagcgtgccaacaacatccgacgacatt
caaacgatcgtcgattcggacgacgaagacatacaacttgtcgtaaacacgcctcgggaa
agtgcgcgaaaaacaccaacccttggtccggactgtgcctggaacgaggaaatgaaggaa
ttctacaacacttcgtgggccggcgaaaacatggatttggaaatggttttaagaaagatg
ccataccataccagacagtggcatattgtgcacagggatcggtttcctgagccacccaga
aaggaaattacctgtaccaactgcggtgaacgtggccacgtgaaaatcagatgtcgcaac
gtaccgaagctggcgatttgctacatgtgtggagagaaaggacacaaggaaccgcgttgc
cccaaaacgatctgcttaaactgtggagcgaaaacgcgtagcttcgtacggggatgtaag
agctgttcacgcgaagctgacgttctatgcttcctgtgcggtgtacggggacacactcag
cgcagttgtccggatttgtggcgtcgatatcacagcacgactgaggataatgttccgcta
aaggaggactttgagaaaaatccaaaagcacgatggtgctccatttgctgccgattcggt
catcaggcacacacgtgcaacgatgcccggcgaatctttggtcatccgatacccaacgtt
aacgttagctcgtacatgccagcgtaccggggagaatacaatcgttacagtaagcatcag
aatgatgagcaggagagacgcctcgcggagaatcctactgcccgatacaatttgtttagc
gaagatgctaatgtgtgtgagttcaatttgcccgagatggcacaaaacgaaaaggggttc
tacttcaattttctcagatcaactggtctgttggaaaagcatgaacagtttaacagggaa
caggaggaagctaaaatgctggaacagagacaacagcaggagcttatgcagccaccggtc
cctcaaacagccatggaatctacacctccacaaaacccacctgttgtgcagataaaggag
gacccacaaccagtaatggaacagtccgctactgttgctgaaccttgccagcaagaacct
accaccagtaaaattatgcctgccggcaacaatgttccagtagtggaagaaaattccaac
tacagtttttccgaatttcaaaccgataccagtacagacatgcataattcgttcgacaat
gtacatcagcatgtggaggaggaaaaatcgccgccaccggccgacaatttggcgacgatc
gaaaacaacaccgaccactggctctctgactatattcctcttactgttgctgatccggtt
gctgcaacgacgtcgacaccctcaccagaactaccacaaatgacagcaccagcaccaaat
ctcccactagctagggcgtccgagccggacgaaatcgcaccaacggcggtagcagaaaat
gcaaaggtactgctcagcaaggagcatgcaactttgctgctgtcagaaaagggtgccgaa
tttctcagctccacaggcaaacagcactgtgtgcagctgagcatcttgttcgaatcggtc
ggcaatgtgctgctcattaccggtacgcccgacgctcagaatgcctttcacgagcggttg
gtacagtacctgagagaaatggaggaagtcactcgaaatagcaaatacttccaaaacgtg
gtacccagaaactttggcaaaatgtcgcgctacattgcaggatatctgcgttttctggtg
cgtgagaaggacagcatgcgccatctgttgacacagctaaaccactccaaaaatccggaa
acgcaggaaaaatgtcgccgccggctaaacacaaccctgttcggtgtgtatggtttgcgg
gatgggcgaatgcatcttaatatactgcgcaaccagttggcgctgtgcaagaaagcgatt
ccccaaaagggtgagctcgaagagtaccagcgtgtaattataagtgatgcgatacggtac
attttctctggctacgatcacaagaactacgatgcagtggtggaagagtttgagctgttg
aaacggacgaacaagctagatatactcacgttctatgatttgggtttatcgaggatcata
aaacatccccaaacctccgagatgccggccgagaaaccaccaagcaaaggaaagaaaaac
aaaaatgctgctaaaccgaatgtggaagtagtactatcaagaaaagctaaaaagcagatg
aaggaaatgatggccgccgcacagcggaatgaatctattaccgagggtaatgttcataac
tctaatacgaccgttggtggtaatgatttcataatgaacacaacaacaaccgcacccttt
ccgacgattgatccggttcggctgcaacagctcgacaactctacgcgctacgtgcatcat
tcatcgcaggagcgcgaaaatgtggcctatgcacactattcgaaaaattggcccaatcgc
gaatggggacgttatgggtcgccaagagacgatcgggtccgttaccactggtaccgacag
tcggatccagaaaaccaacggcaacagcaaagcgcggccgatttatcgcggctggccgtg
cgagctaacacgctacgcgatcaggagttgaatcagctgcaaaggctgcaggatatgtta
cggcggtga
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integrated database retrieval system
