Anopheles maculipalpis: 126561854
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Entry
126561854 CDS
T10890
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
amap Anopheles maculipalpis
Pathway
amap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126561854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amap03019
]
126561854
Messenger RNA biogenesis [BR:
amap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126561854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
PEARLI-4
HEPN_Swt1
DUF3347
Motif
Other DBs
NCBI-GeneID:
126561854
NCBI-ProteinID:
XP_050074153
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All DBs
Position
3RL:complement(71452945..71457087)
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AA seq
624 aa
AA seq
DB search
MSFNFGNTSALGSTSTPTKPAFGNFSFGGQTSTPAFGATAATGAAPAFGQATATSAFGAS
ATPAFGATAATPATGTGAFGTLGFGASTGATTAFGAAPTSSAPSFGFGTNTATAATPAFG
GFGTATSTAATGFGGFGTATATSSSAPAFGGFGTATQPFGTSIATTSAPSFFGGLGASQP
QAATGFGAFGTGSTFGGTTFGQPGAATGGLNFGLSAFGQQQQQQQQQQQQLAQALSPEEA
FVQSVFNVSIFGDERDTVISKWNYLQAMLGTGKSFYSHSAPPVEITPSNFLCRFKTMGYS
KLPGKDNKAGLVGLTVNKTVAQIKEQQQQFITSMSQIFGNKPNITIVVENVKSINDTKVQ
VIIYIEEKSTISNEVKRVLATEVAGYLNQPMPKQQLSQLGIESVVALVLPEEDQLKEYLD
NPPKGIDPRMWEQAKIDNPDPKRFIPVPMIGFQDLKWRIKCQENETEIHASYLAKVEKEI
AELKQRHMNTTAKIAEHRRNFAELSHRILRVIVKQESTRKLGLALSPEEEAIRTKLENMH
ALVSTPTQFRGRLSELLSQMRMQRNQWAHGNFLNEYTLDKDATQEMQSFLTMQQKAVAFL
IDTIHKDMKTLKIISEGMTQLVQG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaattttggaaacacatcagcgctcggttcaacgagcacaccgaccaagccg
gcttttggcaatttctcattcggtggacaaacctctacaccggcgttcggtgctactgcg
gcgaccggtgcagcaccagcttttggacaagcaacagccacgtcggcattcggtgcatcg
gcaacacccgcgttcggtgcaaccgcagctacacctgccaccggtacgggtgccttcgga
acgttaggtttcggtgcatctaccggcgctaccacagcgttcggtgccgcaccaaccagt
tccgcaccatcgttcgggttcggaacaaacacggctacagcagcaacaccggcgttcggt
ggcttcggtaccgccacgtctactgctgcgactggtttcggtggatttggtacggccacg
gccaccagttccagtgcaccagcattcggtggcttcggtacggcgacacaaccattcgga
acatccattgcgaccacttccgcaccatcgttcttcggtgggcttggagcgtcccaaccg
caagctgctaccggtttcggtgcattcggcaccggtagtacctttggtgggacaactttt
gggcaaccgggagccgccaccggaggcttaaattttggcctatcggcctttggtcagcaa
cagcagcagcagcagcaacagcagcagcagcttgctcaagccctttcacccgaggaagcg
ttcgtgcagtccgtgtttaatgtgtccatctttggtgatgagcgcgatacggtcatctcg
aaatggaactacctgcaggcaatgctcgggacgggcaaatcattctactcgcacagtgca
ccaccagtggagattacgccatcgaactttctgtgccgcttcaaaacgatgggctacagc
aaactgcccggaaaggacaataaagctgggttggtggggctgacggttaacaaaacggtg
gcacaaataaaagaacagcagcagcaattcattaccagcatgagtcaaatcttcggcaac
aaacccaacattacgatcgtggtggaaaatgtaaaatcaatcaacgacacgaaggtacag
gtcattatctacatcgaagaaaaatccaccatctcgaacgaggtcaagcgcgtacttgcg
acggaagtggccggctatctgaatcaaccaatgcccaaacaacagctttcccagctcggc
attgaatcggtcgttgcgttggtactaccggaggaagatcagctaaaggagtatctcgac
aatccaccgaaaggtatcgatcctcgtatgtgggaacaggcaaagatcgataatcccgat
ccgaagcgattcattcccgttccgatgattggttttcaggatcttaaatggcgcatcaag
tgtcaggaaaatgaaaccgaaatacacgcatcctatctcgccaaggtggagaaagagatt
gccgagctgaagcagcgccacatgaacacgaccgccaagattgccgaacatcggcgcaac
tttgccgagctgagccaccgcatactgcgcgtcattgtgaagcaggaaagtacccgcaag
ctaggattggccctatcgccggaagaggaagcgattcggacaaagttggaaaatatgcac
gcgctcgtatccaccccgacgcagttccgtggtcggttgagtgagctgctgtcacagatg
cgtatgcagcggaaccagtgggcccatgggaacttcctgaacgagtacacgctcgataag
gatgcaacgcaggagatgcaatcgttccttacaatgcagcagaaggcggtagcgtttctg
atcgatacgatacacaaggatatgaaaacgctgaaaattattagcgaaggcatgacgcag
ctggtgcaaggctag
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