Anopheles maculipalpis: 126563771
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Entry
126563771 CDS
T10890
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
amap Anopheles maculipalpis
Pathway
amap04382
Cornified envelope formation
amap04512
ECM-receptor interaction
amap04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126563771
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126563771
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126563771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amap04147
]
126563771
00536 Glycosaminoglycan binding proteins [BR:
amap00536
]
126563771
Exosome [BR:
amap04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126563771
Glycosaminoglycan binding proteins [BR:
amap00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126563771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126563771
NCBI-ProteinID:
XP_050076455
LinkDB
All DBs
Position
3RL:complement(28586924..28615823)
Genome browser
AA seq
1817 aa
AA seq
DB search
MLRPADPTLPGGLETKDTVHRRRRSSVRSVSLCVTLFLTCLLQLVQPSTAAVCNQTVCDC
KGLKGYQGQMGPHGVPGQSGDPGDFGPDGPPGLRGDVGNRGEIGTSGPKGYRGDSGERGP
MGAPGYAGLPGEPGYRGPFGIDGCNGTDGAMGPPGYPGIPGERGPQGPPGALGPRGDSGE
GGINSKGTKGDRGVAGVPGVPGLPGWQGGRGADGFDGETGPPGDDGLPGPKGERGEQSDD
FCPGEPGDPGEPYHYWGGKNETVSRGMPGPKGDRGLDGMPGMPGMKGDSGMQGERGQKGF
KGEEGKFGDRGKQGKEGPPGAPGEKGEKGAPGYAGLDGMPGDKGPSGDDGRPGLPGVQGP
PGPKGEYRPELAPIVIGPQGPQGDIGPPGRPGNVGIPGNKGLRGPMGPPGPPGDPGLNGR
QGPKGISPPGQRGDDGESGQPGLVGARGTPGNAGPKGQVGFPGRNLQGPKGEPGTNGLNG
DFGEKGDQGDAGEPGDKGLPGIGVNITGPQGPAGFPGRDGPPGDLGFNGYNGPKGDKGFR
GEDCGTCPPGPKGVKGEDGDIGRPGLDGYDGNRGLPGPRGYQGTPGKQGLRGLLGRKGER
GDFGERGAPGEPGRPGVIRRARDFVDLTPELGDRGDMGQRGDQGVPGDLGDYGAVGYPGR
PGEPGEYGDDGEPGRPGQDGLPGIDGRDGMPGRNAYVNEYNIWSIRGTPGIVGDKGAKGE
RGDQGDRGEPGAMSEMTYSIAGAKGVKGVLGDPGPKGEKGYKGEMGLHGLRGLDGPAGLP
GLSIQGPEGYKGYYGVIGDHGPAGMPGDDGLPGPDGIPGLQGLRGQRGDPGRPILMGEKG
VEGEGGFYGEIGEKGFKGPEGIRGISGEPGVKGERGDPGPFGAPGLRGNKGQMGDIIYGD
RGLPGLPGRDGLQAPYGDKGDRGEPGMEGFPGPKGERGEIGRDGLPGLPGDDGLPGERGL
QGRMGDMGEEGELGERGFLGDQGHPGLTGARGMPGVRGPKGPTGDPGDMGFPGRNGVPGR
KGERGDFGDVGPRGRKGSASFSGMKGEMGEAGVMGPPGYNARPGMMGRKGEEGDAGQVID
GYQGVKGQKGAPGFPGIPGRPGAKGERGDVGVFGPKGISGDKGRDGYPGIAGRPGRPGPR
GPVGLRGEQGSRGETGEPGDDGPQGFVGLKGMRGDVGLVGPTGLPGLEGDPGLPGIPGNV
LQRSAQQGDQGDPAPEGLEGDEGPPGLKGQRGYPGRKGDQGLPGFVGEVGREGNDGPKGQ
RGDPGMKGLPGELVSRPERGDQGEAGYDGLTGRPGLPGNKGAPGEYGAYGRAGPQGQPGF
VNGALKGRKGEIGFEGAPGQDGLPGLPGLDGVMGPPGPRGMAGSIGPIMPGFRGDIGDDG
LPGLEGMPGPPGFPGDRGLPGLPGLSGLSGPKGQQGEEGLEGYHGLVGLKGMKGEVGDLP
PLSNWRPTQPGDRGTPGVRGEPGDEGDIGPPGYPGMRGPKGLQGLQGEEGATGEVGLKGE
QGIAGPPGRNGIEGLPGLPGMPGDPAAPPPPPKNLGYLFARHSQKVTIPECPINTYKLWD
GYSLVNVIASSRSMGQDLGTAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPM
PMSMAPIPADQVERYISRCSVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTSD
NSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYDGISSFWLTIIEDDMQFNRPQQMT
LKAHQTSKVSRCIVCRRKAGIMRALHGGSSITASALRRPETATVTRPLYPPAPLPPAVPR
RRVSPGRQRNRNRNYQG
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggccagcggaccccacgctcccggggggtctggaaactaaggacaccgtccac
cggaggcgccgaagttccgtccgctcggtgtctttgtgcgtgacacttttcctgacctgt
ttgctacagcttgtgcaaccatcgacggcagcggtctgcaaccaaacagtatgtgactgc
aaaggattgaaaggttatcagggacagatgggaccacacggtgtacctggccagagcggt
gatcccggagactttggccctgatggtccaccaggactgcgtggtgatgtgggcaatcga
ggagaaatcggtacgagcggtccgaagggttatcgaggtgattcaggcgagcgtggacca
atgggtgcaccaggatatgcgggacttcccggtgagcccggttaccgtggccctttcggt
atagatggttgcaacggaacggacggtgcaatgggaccacccggctatcctggaattccg
ggtgaacgaggccctcagggtccgcccggtgcgctcggtcctcgcggtgactccggtgaa
ggtggtataaactcgaaaggcaccaaaggtgatcgtggagtagccggtgtgcccggtgta
cccggtctgccagggtggcaaggtggtcgaggtgctgatggattcgacggcgagaccggt
ccacctggagacgatgggttacccggaccgaaaggcgaacgaggtgaacagagcgatgat
ttctgccccggagaaccaggagacccgggtgaaccttaccattattggggtggcaaaaac
gaaacggttagcagaggcatgccaggtccgaagggagatcgtggtttagatggaatgccg
ggtatgccgggcatgaagggtgattcaggcatgcagggcgagcgtggtcagaaaggcttc
aagggtgaggagggtaagtttggtgatcgtggcaaacagggcaaggagggtccaccgggt
gcgccgggcgaaaagggagagaaaggtgctcccggttatgctggactggatggtatgccc
ggcgacaagggaccgtcgggagatgatgggcggccgggactgccgggagtgcagggacca
ccgggaccgaagggtgaataccgacccgagctcgcaccgatcgtaattggaccgcaagga
ccacagggcgatattggaccacccggccgacctggtaacgtcggtatacccggcaacaag
ggtcttcgtggaccgatgggacctcccggtccaccaggagatccgggacttaatggacgc
caaggtccgaaaggtatctcgcctcccgggcagcgtggtgacgatggtgagtcaggtcaa
ccgggattggtaggcgctcgtggtacaccgggcaacgccggtccgaagggtcaggttgga
ttcccgggccgtaatctgcagggaccgaaaggtgaaccaggtacgaacggattgaatgga
gattttggtgagaagggtgaccagggtgatgctggtgaacccggcgacaaaggtttgcct
ggtatcggtgttaacatcaccggaccacagggaccggccggatttcctggccgggatggg
ccacctggcgatttgggctttaacggttacaacggtccgaaaggtgacaagggtttccgc
ggagaggattgtggcacttgccctcccggcccgaaaggcgttaagggtgaggatggtgat
attggacgtcctggacttgacgggtacgatggtaatcgtggactgcctggtccacgcggc
taccagggcacaccgggaaagcaaggtctaaggggtttactcggtcggaaaggtgaacgt
ggtgactttggagaacgtggcgcaccgggtgaaccgggacgaccgggtgtcattcggcga
gcgagagattttgtcgacctgacacccgaactcggcgaccgaggagatatgggacagcgg
ggtgaccagggcgtgccaggagatttgggcgattatggcgctgttggatacccgggacga
cctggtgaaccgggcgagtacggtgacgatggtgaaccgggacgccctggacaggatggg
ttgccgggtatagatggtcgcgatggcatgcctggtcgtaatgcttatgtaaacgagtac
aatatctggtcaattcgtggcacgcctggtatagtgggtgacaaaggtgccaaaggagag
cgcggtgaccagggcgatcgtggtgagccgggtgcaatgtccgagatgacgtacagcatc
gcgggtgcaaagggtgtgaaaggtgtactgggagaccccggaccaaagggtgaaaagggc
tacaagggtgagatgggtttgcacggattgcgtggcctagatggaccggccggtttaccg
ggtctcagcattcaaggaccggaaggatacaagggctactacggtgtgatcggagatcat
ggaccagctggtatgcccggcgacgatggactacccggaccggatggaatacctggactg
cagggactacgtggtcaacgaggtgacccaggtcgaccgatactaatgggcgaaaagggc
gtggaaggcgagggcggcttttacggtgagatcggagagaaaggtttcaagggaccggaa
ggcattcgcggaatatccggtgaaccgggagtaaaaggcgagcggggcgatccaggaccg
ttcggtgcacctggcctacgtggcaataagggtcagatgggagacatcatctatggtgat
cgtggattgccaggattgccgggacgcgatggtttgcaggcaccgtacggcgataagggc
gaccggggagaaccaggcatggaagggttccccggtccgaagggcgagcgaggagagatc
ggccgcgatggattgcctggactgccgggagacgatggattgccgggtgagcgaggtctc
cagggacggatgggcgatatgggcgaggagggtgaactaggagagcgcggtttccttggt
gatcagggacatccaggcctgaccggtgcgcgtggaatgccgggagtgcgaggaccgaaa
ggaccgacaggtgatccgggagatatgggattccctggccgtaatggagtccctggacgg
aaaggagagcgtggtgatttcggtgacgtgggaccacgtggccggaagggtagtgcatcg
ttcagcggcatgaagggagagatgggagaggctggagtgatgggcccgcccggatacaac
gcacgacctggaatgatgggccgaaagggtgaggaaggagacgccggacaggtgattgac
ggttaccaaggagtaaagggacagaagggtgcaccaggattcccaggcattcctggccga
ccgggagcgaagggtgagcgtggtgatgttggtgtgtttggaccgaagggaatttccggg
gataagggacgcgatggatatccgggcattgctgggcggccgggacgtccgggacctcgc
ggaccggtcggtctacggggtgaacaaggatcgcgcggtgaaacaggagaaccaggcgac
gatggtccacagggattcgtcgggctgaagggtatgcgcggagatgttggtctggtaggt
cctaccggattgccaggacttgaaggtgatcctggtttgcccggaataccaggtaacgtg
ttgcagcgctcggcacagcaaggtgaccaaggagaccccgcaccggaaggcctggaaggt
gatgaaggacctcccggccttaagggacaacgaggctacccgggccgtaaaggtgatcag
ggattaccaggatttgtcggcgaggttggccgggaaggaaacgacggaccgaagggtcag
cgcggagatccaggtatgaagggactgcccggcgagctagtgtctcggcccgaacgcggc
gatcagggagaagctggttacgatggactgacgggacgtccgggacttccgggtaacaag
ggagcaccaggcgaatatggtgcctatggacgagcgggtccgcaaggtcagccaggcttc
gtaaatggtgcgttgaagggaagaaagggtgagattggtttcgaaggagcaccaggacag
gatggattgcctggattgccaggattagacggtgtgatgggacctcccggaccgcgagga
atggccggtagtatcggtccgattatgcctggtttccggggtgatattggtgatgacggt
ctgccaggattggaaggtatgcccggtccaccaggcttcccgggcgatcgaggattaccg
ggactgcctgggttgagtggcctgtccggacctaagggacagcagggagaggaaggactg
gaaggttaccacggtttggttgggctgaagggtatgaagggagaggtgggcgatctgcct
ccactctcgaactggcgtccaacgcaacccggtgatcgaggtactcccggtgtacgcggt
gaaccaggcgacgaaggagacattggaccgccaggctacccaggaatgcgtggtccgaag
ggtttgcaagggttgcaaggagaggagggcgcaactggcgaggttggcctcaagggtgag
caaggtattgctggcccaccgggacgtaacggtatcgaaggtctgccgggattgccaggt
atgccgggcgatccggccgcacctccaccaccgccaaagaacttgggatacctctttgcc
cgtcactcgcagaaggtcaccatccccgagtgtcctatcaatacgtacaagctgtgggac
ggttactcgctggtaaacgtcatcgctagcagccgctccatgggacaggaccttggtact
gccggctcgtgtctgcggcggttcagcacaatgccgttcatgttctgtgatattaacaac
gtgtgcaattacgcttcgaataatgacgatacgatatggttggccacacccgaaccgatg
ccaatgtcgatggcaccgataccggcggaccaggtcgaacggtacatctcgcgttgcagc
gtttgtgagtctaacacgcgcgtgatggcactgcacagccaatcgatgtccattccggac
tgtcccgaaggatgggaagagttatggctcggatacagttatgcaatgcacacatcggac
aactcgggaggtttcgggcaggactttgtgtcgcccggatcgtgcatggaagagttccga
ccacaaccggtcatcgagtgccacggacatggtacctgcaacttctacgacggcatttcc
tccttctggttgacgatcatcgaagatgacatgcagttcaacaggccgcagcagatgaca
ctcaaagcacatcagaccagcaaagttagtcgatgcatcgtatgtcgtcgaaaggccggc
attatgcgggcactgcacggtggcagttcgataactgcgtcggctctgcgcagaccagag
acggccacggtgacgcgccctctgtatccgccggctccactgccaccagcggttcccagg
agacgagtgtcacctggcagacagcgcaaccgcaaccgcaactaccagggctag
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