Anopheles maculipalpis: 126563776
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Entry
126563776 CDS
T10890
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
amap Anopheles maculipalpis
Pathway
amap04382
Cornified envelope formation
amap04512
ECM-receptor interaction
amap04518
Integrin signaling
amap04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126563776
04518 Integrin signaling
126563776
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126563776
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126563776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amap04147
]
126563776
00536 Glycosaminoglycan binding proteins [BR:
amap00536
]
126563776
Exosome [BR:
amap04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126563776
Glycosaminoglycan binding proteins [BR:
amap00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126563776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126563776
NCBI-ProteinID:
XP_050076463
LinkDB
All DBs
Position
3RL:28617712..28626004
Genome browser
AA seq
1769 aa
AA seq
DB search
MGTRIKWLITTSLIVWYGQHAYAQLWPRGDGIFKRQEPDYPRNTQLDPSYNIIDTASGPQ
GPPSKNCTSGGCCLPKCFAEKGNRGFPGPQGLKGVKGVRGFPGSEGLPGDKGTKGEPGPV
GLQGPKGDRGRDGLPGYPGIPGTNGVPGLSGAPGLPGRDGCNGTDGLPGLSGLPGNPGPR
GYPGIAGSKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGVEGPRGYPGRPGEKGLP
GIPGLRGERGDKGVCIKGLKGQKGAKGEEVYGSTGTTTTMGPEGAKGDRGEPGEPGRPGE
KGQAGDRGQFGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLKGQSGP
KGEPGRDGTPGQPGISGPPGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGEKGERG
QMGPKGGQGVPGRPGPEGMPGDKGDKGEAGSVGLPGPQGPRGYPGQPGPEGLRGEPGQPG
YGIPGPKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRDGEKGEPGRP
GLSGAKGERGMKGEIGGRCTDCRPGMKGDKGERGYAGEPGRPGASGVPGERGYPGMPGED
GTPGLRGEPGPKGEPGLLGPPGPSGEPGRDAEIPMDQLKPIKGDKGEPGEKGLVGVKGEK
GFPGLVGPEGKMGLRGMKGDKGRQGEAGLDGAPGAPGKDGLGGRDGITIKGEPGLKGNVG
YTGDKGDKGYSGVKGEPGKCASIPPNLEEAIRGPQGLQGEKGAPGIQGIRGDKGEMGEQG
RTGAQGNAGPPGAPGPVGPRGLTGHRGEKGNSGPVGPPGAPGRDGMPGAPGLPGSKGVKG
DPGLSMVGPPGPKGNPGLRGPQGERGGMGDRGDPGLPGALGYPGEKGDLGTPGPPGYPGD
VGPKGEPGPKGPAGHPGAPGRPGVDGVKGLPGLKGDIGAPGVIGLPGQKGDMGQAGNDGL
KGFQGRKGMMGAPGIQGVRGPQGVKGEPGEKGDRGEIGVKGLMGQSGPPGMIGLKGDKGL
AGLPGPACLPGLSGEKGDKGYSGPEGPPGEPGAASEKGQKGEPGVPGLRGNDGIPGLEGP
VGPKGDAGVPGYGRPGPQGEKGDVGLTGINGLPGLNGVKGDMGVPGFPGVKGDKGTTGLP
GVPGPPCVDGLPGAAGPVGPRGYDGEKGFKGEPGRIGERGLVGEKGDMGLTGPVGLSGRK
GDRGVPGSPGLPATVAAIKGDKGEPGFPGAIGRPGKVGAPGLPGDTGAKGEMGIQGLPGL
PGPAGLNGLPGMKGDMGPMGEKGDTCPVVKGEKGLPGRPGKTGRDGPPGLTGEKGEKGLA
GLEGPPGPPGPPGPLGRQGEKGDRGDSGLMGRPGNDGLPGPQGQRGLPGPQGEKGDQGPP
GFIGPKGDKGERGRDGLNGLNGPQGLKGDRGLPGLEGVAGLPGMVGEKGDRGLQGMAGLN
GAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGLPGLAGPAGIPGAPGAPGEMGLRG
FEGARGLQGLRGDVGPEGRPGRDGFPGIPGPKGEPGRDCESAPYYTGILLVRHSQSDEVP
VCEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLPILACGQNNVCNYASRND
RTFWLSTSAPIPMMPVTENEMRPYISRCTVCEAPTNVIAVHSQTLHIPECPNGWDGLWIG
YSFLMHTAVGHGGGGQSLSGPGSCLEDFRATPFIECNGGKGHCHYYETQTSFWLVSLEDH
QQFQRPEQQTLKAGNLLSRVSRCQVCIRH
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggggacccgaataaaatggttgatcactacctcgttgatagtctggtatggacagcat
gcgtatgcgcaactatggcccagaggtgatggaatattcaagcggcaggagccggactat
cctcgaaacacacagctcgatcctagctacaacatcattgacacagccagcggcccacag
ggaccaccgtccaagaactgcacctcgggcggctgctgtttaccgaaatgttttgccgaa
aagggtaatcgcggctttcctgggccgcagggtttgaagggcgttaaaggtgttcgcggt
tttcccggctcggaaggtttgccgggtgacaaaggtaccaagggtgagccgggcccggta
ggtttgcaaggccccaagggtgatcgaggccgtgatggtctgcccggttatcccggcatt
cctggcacgaatggtgttcccggactgtcgggcgcgcccggtctacctggccgcgacggt
tgcaacggaacggacggtttgccagggttgtccggtttgccgggaaatccgggtccccgt
ggttatcccggtatcgctgggtcgaagggtgaaaagggtgaaccagcacgtcacccggag
aactacaacaagggacagaaaggtgagcccggtaacgatggactggagggattgcctggc
ccacagggtgtagaaggaccgcgtggatacccaggacggcccggtgaaaagggtttgccc
ggaataccaggactacgtggagaacgaggcgataagggtgtttgcattaagggcttgaaa
ggtcagaaaggtgcgaagggtgaggaggtgtatggatcaacgggtacgacaacgacaatg
ggcccggagggtgctaaaggtgatcgcggcgaaccgggcgaacctggtcggcctggagag
aagggacaagccggagatcggggacagtttggcgagcggggacacaagggcgagaaagga
ttgcctggacaaccgggcccgagagggcgtgatggtaattttggaccagtaggccttccc
ggacagaagggcgaccgaggatcggaaggattgcacggactgaagggtcaaagtggaccg
aagggtgaacctggacgcgatggtactcctgggcagcccggtatctcgggacctccggga
gcacccggtggtggcgaaggacgtcccggtgcaccgggtccgaagggaccacgtggctac
gaaggaccgcaaggaccgaaaggtatggatggattcgatggcgaaaagggcgaacgtggc
caaatgggtcccaagggtggtcagggagtgccgggccgtccaggtccagaaggtatgccc
ggtgacaaaggtgataagggagaagccggttcggttggactgccgggtccgcaaggacct
cgtggataccccggacaacccggtcccgagggtctgcgtggtgaaccaggtcagccggga
tacggcattcccggaccaaagggtaatgctggtatggctggtttcccgggcttgaaagga
caaaaaggcgagcgtggcttcaagggtgtgatgggaacaccgggtgacgcaaaggaagga
cgtccgggagctcctggactgccgggacgcgatggcgaaaaaggtgaaccgggccgtccg
ggtctcagcggagcgaagggtgaacgcggtatgaagggtgaaattggtggacgctgcaca
gactgtcggccgggcatgaagggcgataagggtgagcgaggatacgctggtgaaccggga
cgaccgggagcgagtggtgttccgggcgagcgcggatatccgggtatgccaggagaggac
ggtacgccaggacttcgcggtgaacccggacccaagggtgaaccgggactgttgggtcct
ccgggaccgtcgggagagccaggtcgtgatgcagaaattccaatggatcaactgaaaccc
atcaagggagacaaaggcgagccgggcgagaagggtctggtgggcgtcaagggcgagaag
ggtttcccgggactggtcggaccagaaggaaagatgggtctgcgcggtatgaagggtgac
aagggacgacagggcgaggctggtctcgacggagctccgggcgcaccgggtaaggacgga
ctgggtggacgtgacggaataacgatcaagggtgaaccgggactgaagggtaatgtaggc
tacacgggtgacaagggtgacaagggttactccggggtgaagggtgaaccgggcaaatgt
gctagcattccaccaaacctagaggaggctatccgtggtccacagggattgcagggcgaa
aagggtgctcctggcattcagggcatacggggcgataagggcgagatgggcgaacaggga
cgcacgggagcgcaaggaaatgcaggaccacctggtgctccgggaccggtaggaccacgc
ggtttgacaggacaccgtggcgagaagggtaactcgggtccggtgggtccgcctggtgct
ccaggacgtgacggtatgcccggtgcaccgggactgccaggatctaagggcgttaagggt
gatccgggactttcgatggtgggtccgcccggcccgaaaggtaatccaggattgcggggt
ccgcagggcgaacgtggaggcatgggtgatcgtggcgatccgggtttgcccggtgcgctt
ggctatccgggtgagaagggtgacttgggaacgccgggtcctcccggctatccgggcgat
gttggaccgaagggtgaaccgggtccgaagggaccggcaggccatccaggagcaccgggc
cgtcccggtgtggacggtgtgaagggtttgcctggtttgaagggtgacatcggtgcgcca
ggtgtgattggactaccgggacagaagggtgacatgggacaggcgggtaacgatggtctc
aagggtttccagggtcgcaagggtatgatgggtgcaccgggcattcaaggtgttcgtgga
ccgcaaggtgtgaagggcgaaccgggagagaagggcgaccgaggtgagatcggcgtgaag
ggtttgatgggacagtcgggaccacccggaatgattgggctgaagggagacaagggtctg
gctggattgcctggaccggcctgcttgcctggactttcgggagaaaagggtgacaaagga
tactccggaccggaaggaccgccaggtgaaccgggtgcagcgtctgagaagggacagaaa
ggtgaaccgggtgtaccgggacttcgtggtaacgatggcattcctgggctggaaggtccg
gtcggacccaagggtgatgccggtgtgcctggctatggccggcctggaccacagggcgaa
aagggtgacgtcggtttgacgggcataaacggactgccgggattgaatggcgtgaaaggc
gatatgggcgttccaggattcccgggcgtaaagggagacaagggtaccaccggtttgcct
ggtgttcccggtccgccttgcgtggatggactaccaggcgctgcgggtccagttggtccg
cgcggttacgacggcgagaagggcttcaagggtgaaccaggacgtattggtgaacggggc
ctcgtgggagagaagggtgatatgggcctgacgggaccggtcggtctgtctggacgcaag
ggtgatcgcggtgtacctggttctcctggtcttcccgctaccgttgccgccattaaggga
gacaagggagaacctggtttcccgggcgctattggtcgccctggtaaggttggagcaccg
ggtcttcctggagatacgggtgctaagggtgaaatgggcattcagggactaccaggccta
ccgggtccggcaggattgaacggactaccgggcatgaagggtgatatgggaccgatgggc
gagaaaggtgacacctgtcccgtggtaaagggcgaaaagggtctgccgggtcggccagga
aagacgggccgcgatggaccaccgggactgacgggagagaagggagaaaagggacttgca
gggctagaaggacctccgggacctcccggaccacccggaccgcttggacgacagggcgag
aagggtgaccgtggtgattccggtttgatgggacgccccggcaatgatggactgccggga
ccacaaggccagcgaggtttgccgggaccacagggcgaaaagggtgaccagggaccgccc
ggatttattggaccgaagggtgacaagggtgagcggggacgagacggactgaacggactg
aatggaccgcaaggcttgaagggtgaccgcggtttgcccggactggaaggtgtcgccggt
ctgccaggtatggtcggtgagaagggtgaccgtgggctacagggtatggccggcctaaac
ggtgctccaggtgagaagggacagaagggtgaaacgccacagcttccaccccagcgcaag
ggaccacccggtccgcctggatttaacggaccgaagggtgacaagggtttgccgggcttg
gccggaccggccggtatacccggcgcacccggtgcacccggtgagatgggactacgcgga
ttcgaaggtgcacgcggtttgcagggtctgcggggagatgtcggtccagaaggacgtccc
ggacgtgatggttttccgggcattccgggaccgaagggtgaaccgggacgggactgtgaa
tcggcaccatactacaccggcatattgctcgtacggcacagccagtcggacgaggtgccc
gtgtgcgaaccgggccatttgaaattatgggatggctattcgctactgtacgtggatggt
aacgactatccgcacaatcaggacctcggatcggccgggtcctgtgtgcgcaagttctcc
acattaccgatcctcgcctgcggacagaacaacgtctgcaactacgcatcacgtaacgat
cgaacgttctggctgtcaacgtccgcaccgatcccgatgatgccagttacggagaacgag
atgcgaccgtacatctcacgctgtaccgtgtgtgaggcgcccacgaacgttatcgccgtg
cacagccaaacacttcatattcccgaatgtccaaatggatgggatggtctgtggattggt
tacagtttccttatgcacaccgccgttggtcatggtggtggaggtcagtcactgtccggg
ccgggttcgtgcctggaagacttccgtgccacaccgttcatcgagtgtaacggaggcaag
ggtcactgccattactacgaaacccaaacctccttctggctggtatcgctcgaggaccac
caacagttccagcgaccggagcagcaaacgctcaaggcgggcaacctgctcagtcgagta
tctcggtgccaagtgtgcatccgccattga
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