Anopheles maculipalpis: 126564026
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Entry
126564026 CDS
T10890
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
amap Anopheles maculipalpis
Pathway
amap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126564026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amap03019
]
126564026
Messenger RNA biogenesis [BR:
amap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126564026
mRNA degradation factors
5'-3' decay
Decapping complex
126564026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIA
CDC50
PAT1
Vps39_1
GTP1_OBG
Motif
Other DBs
NCBI-GeneID:
126564026
NCBI-ProteinID:
XP_050076885
LinkDB
All DBs
Position
3RL
Genome browser
AA seq
954 aa
AA seq
DB search
MDSFFGFNTKLPDEHDAGEEEEEEEFGRRFCPQTRTRTLHSPRRSKEDISDEEEYDALND
ETFGSADKGDWEDIHENLVRLERNRNASFPGDDDDVSSGDLLFEDYDFDLQLSKLTQYDT
NDESGRSSVVAQSIGDEFASKLRLDPSIWGSPLKVQPSSPQQPQQYYDRKSNVTPFAQPN
AFHQQQTPARPAGLFPPMKMLSVEDIERSIIQNQHQQNQHQQSLQLLQKQIAQQQQQQQT
FRQSTAHHHQPVVKPREHYTLPPKEAKTIQSLSLLSSLGVPTPALMTPPPHLLAARNCAL
FPPGPPPPSQPPPPPPIAPPLLNHPNRLPLGLLPYNILQARPYSTPINNLAMHPAFPPRC
PPYGSPLQGFMQGPPPPVTIGPPIPQRHPGPPGPFLMQRSPTPLQNNQFNQRLVQEIQQN
HPLLAFNRQLANSFNAPGNGMKMNVPQNLPRSAVKQLHYAQQQQQQQQRLRHGNGIPGGL
AREHDEYANMMSNRDKQWLIGIQLTQLNSDLPYWNDYYFTVFKQRLAAGKGNGGENRIYK
ENQLSHPFTQTTPTSKEHAHLLLLSMLTRNVKGGGGGAGMMNLHRERRSSESKSAYGNDG
KDGCSTARSYTPFQFEKSLGKLQCGSVIAPRKLIDADVMGSDQLNGNGAGTAAEQSLSQR
KARHVLLLIEALYKLLLKLEDKLNPIAIATANLLREKKLRESNGGCPGQLNNIKETGATN
GMLDTDESFDDLSAALIGQLSQEKITSILGVRKGRILIRRSLAVLQDHPSRWTLWGMIFT
ALPCLAKKDRDDAEGLLLALFSEFERQLRSGTMEDLLSVAKTIGASRKVMLCIVSSKFLL
SCIITIIFQMELFCGKNPASLQTTAEDDHWWITFLVDVNQVVKDNIIGPSTGGSISINPD
NNIVRTLRVHFARFGTRVDGTDLLNFITDNGNGQQRLGPIGRKQSLQETNITAK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggattcgttttttggatttaatacaaaactgccggatgagcatgatgccggcgaggag
gaggaggaggaagagtttggccgcagattctgtccgcagacgagaacccgtacattgcac
tcaccgcggcgaagcaaagaagacatttcggacgaggaagagtatgacgccttgaatgat
gaaacgttcggttcggcggacaaaggcgactgggaagacattcacgaaaatctggtacgt
ttagagcgcaaccgaaatgcatcctttcccggggacgatgatgacgttagcagtggcgat
ttgctgtttgaggattacgactttgatctgcaactttcgaaactgacgcagtacgatacg
aacgatgagagtggtcgcagcagtgtggttgcacagagtattggtgatgagtttgctagc
aagttacggttggatcctagtatctggggaagtcccttgaaggtgcaaccatcatcacca
cagcaaccgcagcagtactacgatcggaaatcaaacgtcacgccatttgcacaaccgaac
gcttttcatcaacaacaaactcctgcacggcctgccggattgtttccaccgatgaaaatg
ctttcggtggaagatatcgagcgaagcataatccagaatcagcaccaacagaaccagcat
caacaatcactgcaattgctgcaaaaacaaattgcacaacaacagcagcagcagcaaacg
tttcgccagtccacagcccatcatcatcagccggtcgtaaaacctcgcgaacattacaca
ctaccacccaaggaggccaagactattcaatcgctgtccttgctgtcatcgctaggagtt
ccaacgcccgcactgatgacgccgccaccacatctgttggcagcgagaaactgtgctcta
tttccacccggaccacctccgccatcgcaaccaccaccaccaccaccaattgccccgcca
ttgttgaatcatccgaatcgtcttccgcttgggctactaccatacaacatactacaagcc
cgtccgtactcgactccaattaacaatctcgcaatgcatcccgcttttccaccgcgttgt
ccgccgtacggttcgccactgcaaggatttatgcaaggaccaccaccgccagtaacgatt
ggtccacccatacctcagcgccatccaggaccaccgggaccgtttctgatgcagcgtagc
ccaacaccgttgcagaacaatcagtttaatcagcgacttgtccaggaaattcaacaaaat
catccgctgcttgcgttcaaccgacagctggccaattctttcaacgcgcccggtaatggg
atgaaaatgaacgtgcctcaaaacttgccaagatcggccgtcaaacagctgcactatgca
caacagcagcagcagcagcagcaaaggttgcgacacggcaacggtatacctggtggtttg
gcaagagaacacgatgaatacgcgaatatgatgagcaaccgggacaaacagtggttgatc
ggcatacagctaacacagctgaactctgacctaccttactggaacgattactatttcacc
gtgtttaagcaacgactagcggctgggaaaggaaatggtggcgaaaatcgtatctacaag
gaaaatcaactgagtcatccatttacccagacgactcctactagcaaggaacatgcacat
ctgctactgctatctatgctaacgaggaacgtcaagggtggtggtggtggtgccgggatg
atgaatttgcaccgcgaacgcagaagttccgaatctaaatcggcttacggtaacgatgga
aaagatggttgcagtacggctcgctcctatacgccgtttcagttcgaaaaatctctcgga
aagctacagtgtggaagcgtaattgcaccccggaagctgatcgatgctgatgtgatgggc
agtgaccaactgaatgggaatggcgctggaactgcggccgaacaatctttatcgcaacgc
aaagctcgacatgtactgttgctaattgaagcactgtacaagctgttgctgaagctagaa
gacaagctgaatccgatcgccatagcaacagccaatttactgcgtgaaaagaaattacgc
gaaagcaatggtggttgccctgggcagctgaataatataaaagaaactggtgctacgaat
ggcatgcttgacacggatgagtctttcgatgacctatcagccgctctcataggtcagctt
tcgcaagagaaaattacatccatactcggtgtacgaaagggcagaattttgatccgacgt
tcgttggccgtactccaagaccacccttcgcgctggacgctctggggcatgatcttcacc
gctttgccctgcctggccaagaaagatcgcgacgatgcagagggactgcttctggcactg
tttagcgagtttgagcgccagcttcgatccggcacgatggaagatttgctctcggttgcg
aagacgatcggtgcatcacgcaaggtgatgctgtgcatcgtgagcagtaagtttctcctg
tcctgcatcataacgatcatctttcagatggaactgttttgtggcaaaaatccagcttcg
ctgcaaaccactgccgaggacgatcactggtggataacgttcctggtagacgtgaaccag
gttgtgaaggataatattatcggcccgagcaccggtgggagcatttcgatcaatccagat
aacaatattgtacgcacgttacgggtacactttgcccggttcggtacacgggtcgatggg
acggatctgcttaactttattaccgacaatggaaatggtcagcaaagattgggacccatc
ggtaggaaacaatcgctacaggaaacaaacatcacagccaagtga
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