Anopheles maculipalpis: 126564543
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Entry
126564543 CDS
T10890
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
amap Anopheles maculipalpis
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amap03016
]
126564543
Enzymes [BR:
amap01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
126564543
Transfer RNA biogenesis [BR:
amap03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
126564543
Prokaryotic type
tRNA splicing ligases
126564543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
126564543
NCBI-ProteinID:
XP_050077577
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All DBs
Position
3RL:6147784..6149402
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AA seq
506 aa
AA seq
DB search
MVVREYNEEMKYIERLSPNSFLIKKGFQSNMNVEGIFYANSRLEKLMFDELRNACRPGMT
GGFLPGVKQIANVAALPGIVGRSVGLPDIHSGYGFAIGNMAAFDMSDPTSIVSPGGVGFD
INCGVRLLRTNLFEKDVQPVKEQLAQSLFDHIPVGVGSKGIIPMNAHDLEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVEEIYD
KYAASKMGIEELGQICVMIHSGSRGFGHQVATDALVEMEKAMKRDKIETNDRQLACARIN
SPEGQNYLKAMSAAANFAWVNRSSMTFLTRQAFAKQFNTTPDDLDMHVIYDVSHNVAKME
EHMVNGRPKQLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGSMGTCSFVLTGTETGM
VETFGSTCHGAGRSLSRAKSRRNLDYKDVLRDLEEKGISIRVASPKLVQEEAPDSYKDVR
DVVQTCHDVGISNKAIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgcgagagtataatgaagagatgaagtacattgagcgactttcgccaaacagc
ttcctgattaaaaaaggcttccaatcgaacatgaacgtggagggcatattctacgccaac
agtcggctggaaaagctgatgttcgatgaactgcgcaatgcttgccggcccggaatgacg
ggaggatttctacccggtgttaagcagatagcgaacgtggccgcccttccgggcatcgtt
ggacgctcggttggtcttccggacatccattccgggtatggattcgcaatcggcaacatg
gccgcattcgacatgagcgatccgacctcgattgtatcgcccgggggtgtcggattcgat
atcaactgtggcgtccgtctgctgcgtaccaatctgttcgagaaggatgtacaaccggta
aaggaacagctggcccagagtctgttcgatcacattcccgttggcgttggatcgaagggt
atcattccgatgaatgcgcacgacctagaggaagctctggaaatgggaatggactggtcg
ctgcgtgaaggatacgtttgggcagaagataaggagcactgcgaggagtacggacgtatg
ttgaatgctgacccgagcaaggtaagcttgcgagcgaagaaacgtggtctgccccagctc
ggtacgcttggtgccggtaatcattacgcggaaatacaggtggtggaagaaatttatgat
aaatacgccgcgagcaagatgggaattgaagagcttgggcagatctgtgtgatgatacac
tcgggcagtcgtggattcggccatcaggtagcaacggacgcgctggttgagatggaaaaa
gccatgaagcgggacaagatcgaaacgaacgatcgacagctcgcctgcgcacggatcaat
agccccgagggtcagaactatctgaaggcaatgtcggcggcggccaactttgcctgggta
aaccgtagctcgatgacgttcctcacgcgacaagcgttcgcgaaacagttcaacaccaca
ccggacgatttggacatgcacgtaatttacgacgtatcgcacaacgtggccaaaatggag
gagcatatggtaaacggtcggccgaagcaattgctcgtgcaccgaaaaggatcgacccgt
gcattcccaccgcatcatccactgataccggtcgattatcagctaacggggcaaccggtt
cttgtcggtggatcaatgggaacgtgcagttttgtactgaccggtacggaaaccggtatg
gtagaaacgttcggctcgacatgccacggtgccggtcgaagtttgtcgcgtgccaagtcg
cgccgcaatttggactacaaagacgtactgcgagatttggaggagaaaggtatttcgatt
cgcgttgcatcaccgaagctggtgcaggaggaagcaccggactcgtacaaggatgtccgg
gatgtcgtgcaaacgtgccacgatgtaggtataagcaataaagcaatcaagctacgcccg
attgcggttataaagggttag
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