Anopheles maculipalpis: 126567889
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Entry
126567889 CDS
T10890
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
amap Anopheles maculipalpis
Pathway
amap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126567889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amap03019
]
126567889
03041 Spliceosome [BR:
amap03041
]
126567889
Messenger RNA biogenesis [BR:
amap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126567889
Spliceosome [BR:
amap03041
]
Complex B
Other components
Prp19-related factors
126567889
Complex C
126567889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_12
TPR_2
TPR_8
TPR_10
Mad3_BUB1_I
ARM_TT21_C
NRDE-2
PPR
ARM_TT21
SNAP
Motif
Other DBs
NCBI-GeneID:
126567889
NCBI-ProteinID:
XP_050080190
LinkDB
All DBs
Position
2RL:complement(97820858..97823579)
Genome browser
AA seq
868 aa
AA seq
DB search
MPIASEVNLAEVFFNEEDLPYEEEILRNAYSVKHWMRYVEHKRNAPRFVINTVFERALKE
LPGSYKLWYNYLKTLRKQVKGKCITDSEYEEVNNAFERALVFMHKMPRIWMDYCSFMTGQ
CKITRTRQVFDRALRALPITQHHRIWPLYLEFLKRFDIPETAVRVWRRYLKLCPEDAEEY
VEFLQSIGHLDEAAQQLASIVDNENFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDGI
IRGGLRRYTDQLGHLWNSLAGYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMELLERNPNPTEDHEIDVELRMARFEYLMERRLLLLNSVLLRQNPHNVAEWHK
RVELYEGKPHEIINTYTEAVHTVQPKLAVGKLYTLWVAFAKFYETNKQLADARIVFEKAV
QVDYLKVDELASVWCEWAEMEIRQEQYDEALRIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFKTCKQVYDRIIDLKICTPQIIINYGMFLEEHNYFEEAFKAYE
KGIALFKWPNVYDIWNTYLTKFLNRYGGQKLERARDLFEQCLDGCPPELAKNLYLLYAKL
EEQHGLARHAMAVYERATTAVKEEEMYAMFNLYIKKAAEIYGIPRTRQIYEKAIEVLPEA
DSRQMCVLFAEMETKLGEIDRARAIYAHCSQMCDPRVTADFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSAALINAAVTAGEPPKDAMRALEVKAAETTARAIAAVGASG
GNIMFVRGETQGGAAKDDRVVNPDEIDIDDEEDEDEEDDDENENGTDGNGGTGGDISKKI
PIERQSIPAKVFGSLHREVEKEGNEMDE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcatcggaagttaaccttgcggaagtctttttcaatgaagaagacctccct
tacgaagaggaaatccttcgcaatgcttactccgttaaacactggatgcgctacgttgag
cacaagcggaacgcaccaagatttgtcatcaataccgtgtttgagcgtgcattgaaggaa
ctgcccggttcctacaaattgtggtacaactatctcaaaacgctccggaagcaggtgaaa
ggcaaatgcatcacggacagtgagtacgaggaagtaaacaatgcgtttgaacgtgcgctc
gtcttcatgcacaagatgcctcgcatctggatggactactgttcattcatgaccggccag
tgcaagataactcgcacaaggcaagtgttcgatcgagccctgcgtgcactcccgatcact
cagcaccatcgcatttggcctttgtatttggagtttttgaaacgtttcgatattcccgaa
acggctgtccgtgtgtggcgccggtacttgaagctctgcccggaagatgcggaagagtat
gtcgagtttctgcaatcgatcggtcatctggatgaggcagcccaacagctggccagcatt
gtggacaatgaaaactttgtttccaagcacggcaaatcgaaccatcagctgtggaacgag
ctttgtgagttaatttccaaaaatccggacaaagtacactcgctcaacgtggacggcatt
atccggggtggactgcgccggtacaccgaccagctgggccatctgtggaactcactcgct
gggtattacgtgcgcagtggactgtttgatcgggcacgggatatctacgaggaagccatc
cagacggtcactacggtgcgtgactttagccaggtttttgatgcatacgcacagtttgag
gaattgagccttagcaaggtgatggagttgctcgaacgcaatcccaatccaaccgaggat
cacgagatcgatgtggagctgagaatggcacggttcgagtatctgatggaacgtcggcta
ttgctgctgaacagtgtgctcttacgccagaatccacataacgtggccgaatggcacaaa
cgggtggaactgtacgaagggaaaccgcacgaaatcatcaacacttacacggaagcggtc
cacaccgtacagccgaaacttgccgtcggaaagctctacaccctctgggtggctttcgca
aagttttacgaaacgaataaacaactggcggacgctcggatcgtgttcgaaaaagcggtc
caagtagactacctcaaggttgacgagctggccagcgtttggtgcgagtgggccgaaatg
gaaattcgccaggaacagtacgacgaagcgctacgcatcatgcaaagggcgacagcaatg
ccgaagcgtaaggtagcttatcacgacgacacggagacggtccaaatgcgcgtatacaaa
tcactcaagctgtggtcgatgtacgcagatctggaggaaagtttcggtacgttcaagacg
tgcaagcaggtgtacgatcggattatcgatttgaagatctgcacgccccaaatcatcatc
aactatgggatgttcctggaggagcacaattacttcgaggaagcattcaaagcgtatgag
aagggtattgcgctgttcaaatggcccaacgtgtacgacatctggaacacgtaccttaca
aagttcctaaaccgttatggcggtcaaaagctggagcgagctcgggacctattcgaacag
tgcctggatggttgtccaccggagctggctaagaatctgtacctgttgtacgcgaagcta
gaagagcagcacggtctggcacggcatgcaatggcggtttatgagcgtgctacaaccgct
gtcaaggaggaagaaatgtacgccatgtttaatctctacatcaaaaaagccgccgaaatc
tacggcattccccgaacgcgccaaatttacgagaaagccatcgaggtactgccggaagcg
gattcgcgccagatgtgcgtactgttcgccgagatggaaacgaagctgggcgaaatcgat
cgtgctcgggccatctacgcacactgcagtcagatgtgcgatccgcgcgtaacggccgac
ttttggcagacgtggaaagagttcgaaattcggcacggcaatgaggacacgatgagggag
atgttgcgcatcaagcgttcgatccaggcgacctacaacacgcagatcaacatgatgtcg
gcggcactgatcaatgcagccgtcaccgccggtgaaccgccgaaggatgctatgcgagcg
ctagaggtaaaggcggctgagacgacggctcgtgcaatagcggccgttggtgcatccggt
ggcaacattatgttcgtacgtggcgaaacgcaaggtggagcagcaaaggacgatcgagtg
gttaatccggatgaaatcgacattgatgatgaggaggatgaggatgaggaggacgacgac
gagaatgaaaacggcacggacggtaatggcggaaccggtggagatatcagcaaaaagatt
cccatcgaacgacagagcattccagcgaaagtgttcggtagccttcatcgggaagttgag
aaagaagggaacgaaatggacgaataa
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