Algicella marina: GO499_09865
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Entry
GO499_09865 CDS
T08414
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
amaq
Algicella marina
Pathway
amaq00550
Peptidoglycan biosynthesis
amaq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amaq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GO499_09865 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amaq01002
]
GO499_09865 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amaq01011
]
GO499_09865 (dacB)
Enzymes [BR:
amaq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GO499_09865 (dacB)
Peptidases and inhibitors [BR:
amaq01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
GO499_09865 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
amaq01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GO499_09865 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
QHQ35474
UniProt:
A0A6P1SXR3
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All DBs
Position
complement(1980296..1981771)
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AA seq
491 aa
AA seq
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MNRTRMAEWNRRAVLAGLGASLPGGAMALERAGRPMLRRDGLRERTSVDVVQEGPLAAVT
GFALRDLSDGRMLAAHQPLLSLPPASVAKAVTSLYALEALGSNYRFRTQVLATGAVSGGR
LEGDLYLIGDGDPTLDTDGLAALAAQLKDRGIRSVAGRAFVVDSALPYQRSIDPTQPEHV
GYNPAISGLNLNFNRVHFQWSRAGQGYAVQMTARGRRYDPAVASIEMAVARRNAPVFIYR
GDGGRDTWSVASGALGREGSRWLPVRRPGDYAGEVFRELAHGFGIVLPAFRVAESVPAGT
VLAEVESGDSSRLLRDMLKYSTNLTAEVIGLRTSQARGMAPKSVAASGAAMTGWLRERFG
VHRADFLNHSGLTDRTRMTAAEMVQVLDIAAAGPLPGLLKETAVSVAPGSRERLPGVRVF
AKTGTLNFTRGLAGYLEGSNGRRLAFAIFTADLAARAGAVEGEVPRGAKSWRNRALRQEM
DLLRTWAQTYL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaacgcgaatggcggagtggaaccggcgggcggtgctggccgggctgggcgca
agcctgccgggcggggccatggcgctggagcgggccggtcggccgatgctgcgcagggac
gggttgcgggagcgaacctccgttgacgtggtgcaggaaggacctctggctgctgtcacc
ggctttgcgttgcgtgatctttcggacgggaggatgctggcagcgcatcagccgctgctg
agcctgccaccggcgtcggtcgccaaggcggtcacttcgctttatgcactggaggcgctg
ggcagcaactaccggttccggacacaggttctggccactggagcggtttcaggcggacgt
ctggagggagatctgtacctgatcggcgatggcgacccgacattggatacggatgggttg
gcggcgctggcggcgcagttgaaggaccggggcatccgctccgtcgccggacgggccttc
gtggtggacagtgccttgccgtatcagcgcagcattgacccgacgcagccggaacacgtc
ggctacaacccggcaatttccggcctcaacctcaatttcaatcgggtgcatttccagtgg
agccgggccgggcagggctacgccgtgcagatgacagcgcgggggcgccgctatgatccg
gcggtggcaagtatcgaaatggcagtggcgcggcgcaatgcgccggtgttcatctatcga
ggtgatggtggccgggacacgtggagcgtggcgtccggagcgttgggccgggaaggcagc
cggtggctgccggtgcgcaggccgggcgactacgcgggcgaagtctttcgggaactggca
cacgggttcgggatcgtgctgccagcgttccgcgtggcggagagtgtgcctgcggggacc
gtgctggcagaggtggagagcggagacagcagccgactgctgagggatatgctgaaatac
tcgaccaacctgacggcagaggtgatcgggctgcggacgagccaggcgcggggcatggcg
ccgaaatcggtggcagcttccggtgcggccatgacaggctggttgcgggagcggttcggc
gtgcatcgtgccgatttcctgaaccactccggtctgaccgaccggacgcggatgacggca
gcggagatggttcaggtgctggacatcgccgcggctggccctttgcccggcctgctgaag
gaaacggcggtgagtgtggccccgggcagccgcgagaggctgcccggcgtgcgggtcttc
gcgaagacgggaacgttgaacttcacccgcgggctggcgggatacctggaggggagcaat
gggcggcggctggccttcgcgatcttcaccgccgatctggcggcgcgggccggagccgtg
gaaggtgaggtgccgcgcggtgcgaaaagctggcgcaaccgggcgctgcggcaggagatg
gacttgttgaggacgtgggcccagacctacctctaa
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