Algicella marina: GO499_10815
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Entry
GO499_10815 CDS
T08414
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amaq
Algicella marina
Pathway
amaq03410
Base excision repair
amaq03430
Mismatch repair
amaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO499_10815 (recJ)
03430 Mismatch repair
GO499_10815 (recJ)
03440 Homologous recombination
GO499_10815 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaq03400
]
GO499_10815 (recJ)
DNA repair and recombination proteins [BR:
amaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GO499_10815 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GO499_10815 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GO499_10815 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QHQ35634
UniProt:
A0A6P1SY69
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All DBs
Position
2181266..2183014
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AA seq
582 aa
AA seq
DB search
MSAFLDVGQSLTGRVWRGPEDDLRRRAEALAQQTGHSEHVCLLLARQGVTADEAEGYLAP
SLRNLMPDPSSLRDMDTAVAALTSAVRGGGRIAIFADYDVDGGASAALLIDWLRQMGHQA
TLYIPDRIDEGYGPNDTAMEMLAENHDLIICVDCGTLSHAPIAAAKARGAEVIVLDHHLG
GETLPDCAAVVNPNRQDEITPLTYLCAAGVVFMALVAANRTLKADGARVPNLLPMLDLVA
LATVADVAPLLGLNRAFVRQGLTVMSHRQRVGLTALADVAGLKTAPAAYHLGFLLGPRVN
AGGRIGAADLGARLLATEDPREAEALARRLDDLNGERRAIEAAVLEDAQAQAEARGAEGP
LVWAAGEGWHPGVVGIVASRLKESFNRPAVVIGLENGIGKGSGRSVAGVDLGAAIATCTR
EGLLAKGGGHKMAAGLTVAQAQLEPAMARLAELLERQGAATEGPRDLSITGLLSCTAATA
DLISELETAGPFGAGVSAPRFALPAQRIAFAKRAGETHLRLSFRDATGSLDAIAFRAFDG
PLGPALEAHGGRAFHLAGRLEIDDWGGRRKAKLRLEDAAPAD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcgtttctggatgtcgggcagtcgctgaccgggcgggtctggcgcggaccggag
gatgatctgcggcgccgggcggaagcactggcccagcagaccggccacagtgagcatgtc
tgcctgctgctggcccgacagggcgtgacggcagatgaagccgagggatatctggctcca
tcgctgcgcaacctgatgccggacccctcctccctcagagacatggacaccgcggttgcg
gcgctgacgtcggccgtgcgcggcggcggtcggatagcgatcttcgctgattacgatgtc
gatggcggtgcctcggcggcgttgctgatcgactggctgcggcagatgggccatcaggcc
acgctctacatccccgaccggatcgacgaaggctacggcccgaacgatacggccatggaa
atgctggctgagaaccatgacctgatcatctgcgtcgattgcggcaccctcagccacgcg
ccgatcgccgccgcgaaggcacgcggagcggaggtgatcgtgctcgaccatcacctcggc
ggcgagacgctgccggactgcgcggcggtcgtgaaccccaaccgccaggacgaaatcaca
ccgctgacctatctctgcgccgccggtgtggtgttcatggcactggtcgccgccaaccgg
acactgaaggcggacggcgctcgggtgccgaacctgctgccgatgctggacctcgtggca
ctggcgaccgtggcggatgttgcgccactgctgggtctgaaccgggccttcgtgcggcaa
gggctgacggtgatgagccaccggcagagggtgggcctgaccgcgttggccgatgtcgcc
gggctgaagacggcaccagcggcctatcacctcggctttctgctcggcccccgtgtcaat
gccggcggccggataggcgccgccgatctcggcgcccgccttctggccaccgaggacccg
cgcgaggcggaggcactggcccgccgcctcgacgacctcaacggcgagcgccgcgccatc
gaggccgcggtgctcgaagatgctcaggcgcaggcggaagcccgtggcgccgagggcccg
ctcgtctgggcggcgggcgagggttggcaccctggcgtcgtcggcatcgtcgcatcgcgg
ctgaaggagagcttcaatcgtccggcggtggtgatcgggctggaaaatggcatcggcaag
ggctccgggcgctccgtcgccggggtcgatctgggcgctgcgattgcgacttgcacgcgc
gagggcctgcttgccaagggcggcggtcacaagatggcggcggggttgacggtggcgcag
gcgcagcttgaaccggcgatggcacggctggcggaactgcttgagcggcagggcgcagcc
accgaggggccgcgtgatctgtcgatcaccgggctgctctcctgcaccgcagccacggcc
gacctgatttccgaactcgaaaccgctggcccattcggtgcgggcgtctccgccccgcgt
ttcgccctgcccgcccagcgaattgccttcgccaaacgcgcaggcgaaacccacctgcgc
ctgtcgttccgagatgccacgggatcgctagacgccatcgccttccgcgccttcgacggc
ccgctcggcccggcgttggaagcccacggcggccgcgccttccaccttgccggccggctg
gaaatcgatgactggggcgggcggcgaaaggccaagctgcggctggaggacgccgccccg
gccgactga
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