Algicella marina: GO499_12125
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Entry
GO499_12125 CDS
T08414
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amaq
Algicella marina
Brite
KEGG Orthology (KO) [BR:
amaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaq03032
]
GO499_12125 (topA)
03400 DNA repair and recombination proteins [BR:
amaq03400
]
GO499_12125 (topA)
Enzymes [BR:
amaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GO499_12125 (topA)
DNA replication proteins [BR:
amaq03032
]
Prokaryotic type
DNA Topoisomerases
GO499_12125 (topA)
DNA repair and recombination proteins [BR:
amaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GO499_12125 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QHQ35867
UniProt:
A0A6P1T1K6
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All DBs
Position
2439917..2442628
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AA seq
903 aa
AA seq
DB search
MAVVVVESPAKAKTINKYLGKDYTVLASYGHVRDLPPKDGSVDTDHEFEMKWEVASASQK
HVRAIAEALKDDDTLILATDPDREGEAISWHLQEALTKRRAIKKDTKVERVVFNAITKSA
VTEAMKNPRAVDMELVEAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVALRLIVE
REMEIEAFNAREFWSVRAMLETPRGQQYEARLTHLAGKKLDKFDIATAEAAELAVTAVAS
RDLKVASVEAKPASRNPSAPFMTSTLQQEASRKFGFGARQTMSTAQRLYEAGYITYMRTD
GIDMAPEAVTAAREAIKSRYGAEYIPGSPRIYKNKAKNAQEAHECIRPTDMALSAEDLGS
LEADQKKLYDLIWKRTLASQMEAAKLERTTVDVSSDDGQITLRATGQVIQFDGFLRVYEE
GRDDVGDDEDGKRLPQISEGEAAAKARRGLAEAFAKLTPDAVVESPGTLQKEANAILGGE
GAVLGQQSFTQPPPRYTEATLVKRMEELGIGRPSTYASIVSVIQERDYVRKEQNRLIPED
KGRLVTAFLENYFRKYVGYDFTADLENDLDRITSGDAQWKTVLTRFWTDFRAALDETADL
RITEVLEKINEVLAPHIFPAEEDGSDPRICKNCGAGRLSLKTARSGGAFIGCSNYPECRY
TRPLSGELEGGDIAGPDGKVLGLNDEGETITLRTGRFGPYVQQGDVTEEVPKPKRASVPK
GEDLSTVDLPRALQLLSLPRKVGDHPEGGIVEAAIGRFGPFVVWVRPPAEGEKKESKTYA
NIKDPAEVYTIGMNRAMELIAQKAASGRGRGAAATPLKELGEHPDGGPVNVMPGRYGPYV
KWEKVNATIPKETKPEDVTMEQALELIAAKAPKKKAPAKKKTAPKKSTAKKPASKKTAST
KGS
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgtcgttgttgaaagtcctgcaaaggcaaagacgatcaacaagtacctcggc
aaggattacaccgttctcgcctcctacggccacgtgcgcgacctgccgccgaaggatggc
tccgtcgacaccgaccacgagttcgagatgaaatgggaggtggcgagcgcttcgcaaaaa
cacgtccgcgccattgccgaggccctgaaggatgatgataccctcattctcgcgaccgac
cccgatcgcgagggcgaggcgatttcctggcacttgcaggaagcgctgacgaagcgccgc
gccatcaagaaggacacgaaggtagagcgggtggtgttcaacgccatcaccaaatccgcc
gtgaccgaggcgatgaagaacccccgcgccgtagacatggaactggtggaggcctatctc
gcccgccgcgcgctcgattacctcgtgggtttcaacctctcgcccgtgctatggcgcaag
cttcccggcgcaaaatccgccggccgcgttcagtccgtggccctgcgcctcatcgtcgag
cgcgagatggagatcgaggcattcaatgcccgcgaattctggtcagtccgtgcgatgctg
gaaacaccccgtggccagcagtacgaggcccggctgacgcatctggccggcaagaagctc
gacaagttcgacatcgccaccgccgaagctgccgaacttgcggtcaccgccgtcgcctcc
cgcgatctgaaggtcgccagtgtcgaggcgaaacccgcctcccgcaacccctccgcgccg
ttcatgacctccaccctccagcaggaggccagccgcaaattcggttttggcgcccgtcag
acgatgagcaccgcccagcgcctctatgaggccggttatatcacctacatgcggacggac
ggcatcgacatggcgccggaggccgtcaccgctgcccgcgaagccatcaaatcccgctat
ggtgcagagtacattcccggcagcccccgcatctacaagaacaaggccaagaacgcccag
gaagcccacgaatgtatccgcccgaccgacatggcgctctcggcggaggatctgggatcg
ctggaggccgaccagaagaaactctacgacctgatctggaaacgcaccctggccagccag
atggaagccgcgaagctggagcggacaaccgtcgatgtttcctcagacgacggccagatc
accctgcgtgccactggtcaggtgatccagttcgacggcttcctgcgtgtctacgaggaa
ggccgcgatgatgtcggcgacgatgaggacggcaagcgcctgccccagatctccgaggga
gaagcggcggccaaggcacggcgcggccttgccgaagccttcgccaaactcactcccgac
gccgtggtcgagtctcccggcacgctccagaaggaagccaacgccatcctcggcggcgag
ggtgccgtactcggccagcagagcttcacccagccaccgccccgctacaccgaggcgaca
ctggtaaagcgtatggaagaactcggcatcggccgcccctccacctacgcgtccatcgtt
tccgtgatccaggagcgggattacgtccgcaaggaacagaaccgcctcatcccggaggac
aagggccgtctggtgacggcattcctagagaactacttccgcaaatatgtcggctacgat
ttcaccgccgatctcgagaatgatctggaccgcatcacctccggcgacgcccagtggaaa
accgtgctcacccgcttctggacggatttccgcgccgccctcgacgaaaccgcggacctg
cgaatcaccgaggtgttggaaaagatcaacgaggttctcgccccccacatcttccccgcc
gaggaagacggcagcgacccgcgcatctgcaagaactgcggcgcaggccgcctcagcctc
aagacggcccgctccggcggcgccttcatcggctgttccaactatcccgaatgccgttac
acccgccccctctccggcgaactggagggcggtgatatcgccggtccggacggcaaggtt
ctcggcctcaacgacgaaggcgagacgatcacgctgcgcaccggccgcttcggcccctat
gtccagcagggcgacgtgactgaagaggtgccgaaacccaaacgcgcctccgtccccaag
ggcgaggatctctccaccgtcgatctgccccgcgcgcttcagctcctctccctgccccgc
aaggtcggcgaccacccggagggcggcatcgtcgaggccgcgatcggccgcttcggcccg
ttcgtggtgtgggtcagacccccggcggaaggagaaaagaaagagagcaagacctacgcc
aacatcaaggacccggcggaggtctataccatcggcatgaaccgcgcgatggaactgatc
gcccagaaagccgcctccggccgtggccgcggcgccgccgccaccccgctgaaggaattg
ggggaacaccccgatggaggccccgtgaacgtcatgcccggccgctacggcccctacgta
aagtgggagaaggtcaacgccacgattccgaaggaaaccaaacccgaagacgtgacgatg
gagcaggcgctggagctgattgccgccaaggcgccgaagaaaaaagcacccgccaagaaa
aaaactgcaccgaaaaaatcgacggccaaaaaaccggcgagcaaaaaaactgcttcaacc
aaaggtagttag
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