Algicella marina: GO499_12825
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Entry
GO499_12825 CDS
T08414
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
amaq
Algicella marina
Brite
KEGG Orthology (KO) [BR:
amaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaq03400
]
GO499_12825 (addA)
Enzymes [BR:
amaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GO499_12825 (addA)
DNA repair and recombination proteins [BR:
amaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GO499_12825 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_12
AAA_30
SLFN-g3_helicase
DEAD
Motif
Other DBs
NCBI-ProteinID:
QHQ35992
UniProt:
A0A6P1T601
LinkDB
All DBs
Position
2582064..2585420
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AA seq
1118 aa
AA seq
DB search
MIDPNHPATLAQTRAARPTRSTWVSANAGSGKTRVLTDRVARLLFSGTDPMQILCLTYTK
AAAAEMQNRLFRRLGEWAMMPDEPLAEELVRLGETQAASEETLRNARTLFAAALETPGGL
KIQTIHAFCDRLLRRFPLEAGVSPGFEMLEERQQAQLTAQILDEMSDGPEFAAYAPWLEA
EPDRHVEAILRYRDAFATIPDEAALLREFGLNAILGPEEVLARLMGSVADNDLADLVVTF
ETAGGTIEKRNAPLLRQILAGGLSAERALEALLGIILTAKGEPRKSGFPTKGVADTMPGA
TDICDTLTEAALEARETLLAGATARRTLALRRFGHAFLGRYNAAKAARALLDFDDLILRA
QALLHDSPSAAWVQYKMDNGIDHVLVDEAQDTSPAQWQVIKALTEDFFAGLSARDTPRTV
FVVGDEKQSIYSFQGADPAAFGEMRAHYRNVIAAATEPMEVCQLLHSFRSAPPVLQVVDE
VFRQSPVHGLGQQISHAAFNSGMPGRVELWPFIEPPEKSEEPPWDDPVDMPPKDDPAIQL
AARIADWAQDLLAAGHRLPGGDRPIQPRDILILVRSRGTIFHAVNAALQRAGVPVSGADR
VQLTKSLAVRDLLSLLRFLATEADDLALAEYLRSPLGGLSEAQLYRLAQPRDGSLWAALR
AAPDHADVAARLTSLRNQADFLRPYELLQRALASQSGRAQLTARLGAEAEDAIDALLDLA
LQYDTVEAPTLTGFLAWVEATDAEVKRQLDSRSNQIRVMTIHGAKGLEAPIVLMPQTHSP
REGNTTPRVTAAGDAIFPHVSVAERPEALAPVEEARKARALEESWRLLYVGLTRARSWLI
VCGGGDRGKDADTVWYQAVEGAMQTLGQEEDDGILALQSPEWVLEPMGAAPDPQPAPVRL
PPWARERGPKVPDAEEILTPSSGGDGAHALPGPDGDDPDAAKARGTALHTLLERLVQAEP
LAEADALALLAASPLAPDTLPALVAEANATRLAPDLQWLWQAEALTEVAVSGRVASLGGQ
VLNGRIDRLLLPQASGGDVWAIDFKSNRTVPATAAHIPQGLVRQMALYQAALAEIFPGHR
IRTALLWTATQSLMEIPHNIVTDWLQRHQGVDQPAPAT
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacccgaaccaccccgccaccctggcgcaaacccgcgccgcccgcccgacccgt
tcaacctgggtgtcggccaatgccggctccggcaagacccgcgtgctgaccgaccgcgtg
gcccggctgctgttctccggcaccgacccgatgcagatcctctgcctcacctataccaag
gcagcggcggcggagatgcagaaccgcctgttccgccgcctcggcgagtgggcgatgatg
cccgatgaaccgctggcggaggagctggtgcggctcggtgagacacaggcagccagcgag
gagacgctgcgcaatgcgcgaacactgttcgcagccgctctggaaacgccgggtgggctg
aagatccagacgatccatgccttctgtgacaggctgctgcgccgatttccgctggaggcc
ggtgtttcccccggcttcgagatgctggaagaacggcagcaggcgcaactgacggcacag
atcctcgacgaaatgtccgacggcccggaattcgcggcctacgccccctggctggaggcc
gaaccggacaggcatgtcgaggcgatcctgcgctaccgcgatgccttcgccaccatcccg
gacgaagcggcgctgctgcgcgaattcggcctcaatgccatcctcggcccggaggaagtg
ctggcgcggctcatgggcagcgtcgccgacaatgaccttgcggacctcgtcgtcactttc
gagacagcaggcggcaccatcgagaaacgcaacgcgccgttgctgagacagatccttgcc
ggcggcctgtcagcggaacgggcactggaggcgctgctggggatcatcctcaccgccaag
ggcgagccgcgcaaatccggctttccaaccaagggcgtcgccgacaccatgcccggtgcg
acggatatctgtgacacgctgaccgaggcggcgctggaagcccgcgaaaccctgctggcc
ggggccacagcccgccgaacgctggcgctccgccggttcggtcacgccttcctcggccgc
tacaatgccgccaaggccgcccgtgccctgctcgatttcgacgacctgattctgcgggcg
caggccctcctgcacgacagcccctccgccgcctgggtgcagtacaagatggacaacggc
atcgaccatgtgctggtcgacgaggcgcaggataccagcccggcacaatggcaggtcatc
aaggcgctgaccgaggatttcttcgccggtctctcggcccgcgacacgccccgtaccgtc
ttcgtcgtcggcgatgagaaacagtcgatctattcctttcagggggcggacccggcggcg
ttcggcgaaatgcgcgcgcattaccgtaacgtcatcgccgccgccacagaaccaatggag
gtgtgccagcttctccattccttccgctccgccccgccggtgcttcaggtcgtggacgaa
gtcttccgccaaagcccggttcacgggctcggccagcagatcagccacgccgccttcaat
tccggcatgccgggtcgtgtcgaactctggcctttcatcgagccgccggaaaaatccgaa
gagccgccctgggatgacccggtggacatgccgccgaaggacgatccggccatccagctt
gccgcgcgcatcgccgactgggcgcaggacctgctggccgctggccaccggctgccgggc
ggtgaccggccgatccaaccgcgggacatcctgatcctcgtccgctcccgcggcacgatc
ttccacgccgtcaacgccgcactgcaacgggctggcgtgccggtttcgggcgcggaccgg
gtgcagttgacaaaatccctcgccgtccgcgatctgctttcgctgctgcggttcctcgcg
accgaggccgatgacctcgccctcgccgaatacctccgttcccctcttggcggcctgtcg
gaggcgcaactttaccgccttgcccagccccgtgacggctcgctctgggccgcactgcgc
gcggcgccggatcatgccgatgtcgccgcgaggttgacctccctgcgcaatcaggccgat
ttcctccgcccgtatgagttgctgcaacgcgcccttgccagccagtccggccgggcgcag
ctgacggcacgactgggtgcggaggcggaagatgccatcgacgccctgctggacctcgcc
ctgcaatacgacactgtggaggccccgacgctgacaggattcctcgcgtgggtcgaggcg
acggacgcagaggtaaagcgtcagctggacagccgcagcaaccagatccgggtcatgacg
atccacggcgccaaggggctggaggcgccgatcgtgctgatgccccagacccactccccc
cgcgagggcaataccacgccccgcgtcaccgccgccggtgatgccatctttccgcatgtc
agcgtcgccgaacggcccgaggcgctcgccccggtggaggaggcccgcaaggcccgcgcg
ctggaggagagctggcggctgctctacgtcggcctgacccgtgccagaagttggctgatc
gtctgcggcggcggcgaccgtggcaaggatgccgacaccgtctggtatcaggccgtcgaa
ggcgcgatgcagacgctgggacaggaagaagacgacggcattctcgccctgcagagcccg
gaatgggtgcttgaaccgatgggcgcagcgcccgatccgcaaccggcaccggtgcgtctg
ccgccttgggcgcgggagcgggggccgaaagtgccggatgccgaggaaattcttaccccg
tccagcggcggcgacggtgcccatgccctgcccggccccgatggcgacgatccggacgcg
gccaaggcccgtggcacggcgctgcacacgctgctggaacgcctcgtgcaggccgaaccg
ctggcggaggcggatgccctcgccctgcttgccgccagcccgttggcgcccgataccctg
ccggcccttgtggccgaggccaacgccacgcgtctggcgccggacctgcagtggctctgg
caggccgaagccctcaccgaagtcgcggtgtccggccgcgtcgccagcctcggcggccag
gtgctgaatggccggatcgaccggctgttgctgccgcaggcgagcggcggcgatgtctgg
gccatcgacttcaagtccaaccggaccgtcccggccaccgccgcgcacatcccccagggg
ctcgtccgccagatggcgctttatcaggcagcgctggcggaaatcttcccgggccaccgc
atccgcaccgctctactctggacagcaacccagagcctgatggaaattccacacaacatc
gtgacggactggttgcaaagacaccaaggtgttgaccagcccgccccggctacctag
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