Algicella marina: GO499_16415
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Entry
GO499_16415 CDS
T08414
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
amaq
Algicella marina
Brite
KEGG Orthology (KO) [BR:
amaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaq03032
]
GO499_16415 (gyrB)
03400 DNA repair and recombination proteins [BR:
amaq03400
]
GO499_16415 (gyrB)
Enzymes [BR:
amaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GO499_16415 (gyrB)
DNA replication proteins [BR:
amaq03032
]
Prokaryotic type
DNA Topoisomerases
GO499_16415 (gyrB)
DNA repair and recombination proteins [BR:
amaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GO499_16415 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QHQ36643
UniProt:
A0A6P1T4M1
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All DBs
Position
3344904..3347318
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AA seq
804 aa
AA seq
DB search
MSENEQPKEEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADTVSVTIHADESVSVSDNGRGIPVDIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDWLELRIWRNGKEHVARFEGGFTTEHLKVVGDANGRRGTEVRFLAST
DTFSNRNYIFKTLEHRLRELAFLNSGVRITIRDERGAEAQETELVYEGGVKEFVRYLDRS
KTPLLPEPIFVEGTRDDIGVEVAMWWNDSYHENVLPFTNNIPQRDGGTHMAGFRGALTRT
INNYVGSSGLAKKEKVTLSGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVEGL
MNEKLAEWFEENPTEARHIVGKIVEAAQAREAARKAREMTRKSAMSVASLPGKLADCQEK
DPAKSEIFLVEGDSAGGSAKQGRSRHNQAVLPLRGKILNVERARFDRMLGSQEIGTLITA
LGTGIGRDEFDIDKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPELIDGGYLYIAQPP
LYKVARGKSEVYLKDQPALEDYLIEMGLENTTLHLGNGTVVAGGDLARVVAEAREARTYL
NAFPTLYPRPILEQTAIAGAMLPGRLDNDPQGTADNVAARLDAIATEYERGWQGRPTQDA
GLRLFRTLRGVEEVRTLPGPVLRGGEARRLGAMTDSLQEIYGQLPNLVRREKIIPISGPL
TLLAAIMTEGEKGLSLQRYKGLGEMNPGQLWETTLDPEARTLLQVRVDQVDDANEVFTKL
MGDVVEPRRAFIQENALSVENLDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaatgagcagcccaaggaagaatacggtgccgattccatcaaggttctgaag
ggccttgaagccgtgcgcaaacggcccggcatgtacattggcgacacggatgacggctcc
ggcctgcaccacatggtctacgaggtcgtggacaacggcatcgacgaggctctggctggc
catgccgacaccgtcagcgtgacaattcatgccgatgaaagcgtctccgtttccgacaac
gggcgcggcattcccgtggacattcatgaggaagagggtgtcagcgccgccgaggtcatc
atgacccagcttcacgcaggtgggaaattcgacagcaattcctacaaggtgtcgggtggc
ctgcacggcgtcggcgtgtctgtcgtcaacgccctgtcggattggcttgaattgcgcatc
tggcgcaacggcaaggagcatgtggcgcggttcgagggtggtttcacgaccgagcacctg
aaagtcgtgggtgacgccaatggccggcgcggcacggaagtacgctttcttgcctctact
gatacgttttccaatcgcaactacatcttcaagacgctggaacaccggctgcgggaactg
gcattcctcaattccggtgtccggatcacaattcgcgatgagcggggtgcggaggcacag
gagaccgaactggtctacgagggcggcgtgaaggaatttgtgcggtacctcgaccgctcc
aaaacgcccctgttgccggagccgatcttcgttgaaggcacgcgcgacgacatcggcgtg
gaagtggcgatgtggtggaacgacagctaccacgagaacgtgctgcccttcacaaacaac
attccgcagcgcgacggcggcacgcacatggccggcttccgcggcgctctgacgcggacg
atcaacaactatgtcggctcgtctggcctggcgaagaaggaaaaggtcacgctgtcgggc
gatgatgcgcgcgaggggctgacctgtgtgctctcggtcaaggtgccggatccgaagttc
agcagccaaaccaaggacaagctggtttcatccgaggtacgccccgccgtcgagggactg
atgaacgagaaactcgccgagtggttcgaggaaaacccgaccgaggcccgccacatcgtc
ggcaagatcgtcgaggccgcgcaggcccgggaagccgcgcgcaaggcgcgggagatgacg
cgcaaatccgccatgtccgtcgccagcctgcccggcaagctggccgactgtcaggagaag
gaccccgcgaaatccgagatcttcctcgtggagggtgacagtgccggcggctccgccaag
cagggacgctcgcgccacaaccaggctgtgctgcccctgcgcggcaagattctgaacgtg
gagcgggcgcgcttcgaccggatgctcggcagtcaggaaatcggcacgctgatcaccgcg
ctcggcactggcatcggccgcgacgagttcgacatcgacaagctgcgctatcacaagatc
atcatcatgactgatgcggatgttgacggcgcccatatccgcactctgctgctgacgttt
ttctaccgccagatgcccgaactgatcgatggcggctatctctacatcgcacaaccgcca
ctctacaaggtcgcgcgcggcaagtcagaggtctatctcaaggatcagccggcgctggag
gattaccttatcgagatggggctggagaacaccacgcttcatctgggcaacggcaccgtc
gtcgccggtggcgaccttgcgcgagtggtggcggaggcgcgcgaggcgcggacctacctc
aacgccttcccgacgctctatccccgcccgatcctagaacagacggcgattgccggtgcc
atgcttcccggcaggctggacaatgatccgcagggcacagccgacaacgtcgccgctcgt
ctggacgctatcgccacggaatacgaacgtggatggcaggggcgcccgacgcaggatgcc
ggtctgcgcctgttccgcacactgcgtggggtcgaggaagtacgcaccctgcccggcccc
gtattgcgcggtggcgaggcgcgacgccttggagccatgactgacagtctgcaggaaatc
tatgggcaattgcccaatctcgtgcggcgcgaaaagatcatcccgatctcaggcccgtta
accctgctcgctgccataatgacggagggagagaagggcctttcgctccagcgctacaag
gggctgggagagatgaaccccggtcagctctgggaaaccacgctggacccggaggcccgc
acgctgttgcaggtgcgtgtcgaccaggttgatgacgctaacgaggtcttcaccaagctg
atgggtgacgtggtggaaccgcgacgcgccttcattcaggaaaacgccctcagtgtcgaa
aatctcgacatctga
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