Algicella marina: GO499_16425
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Entry
GO499_16425 CDS
T08414
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
amaq
Algicella marina
Brite
KEGG Orthology (KO) [BR:
amaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaq03032
]
GO499_16425
03036 Chromosome and associated proteins [BR:
amaq03036
]
GO499_16425
03400 DNA repair and recombination proteins [BR:
amaq03400
]
GO499_16425
DNA replication proteins [BR:
amaq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GO499_16425
Chromosome and associated proteins [BR:
amaq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GO499_16425
DNA repair and recombination proteins [BR:
amaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GO499_16425
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
SctB2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QHQ36645
UniProt:
A0A6P1T4G8
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All DBs
Position
complement(3348468..3348758)
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AA seq
96 aa
AA seq
DB search
MAQKPMTKTQLVAALAEKTDSDKTTANSMLAALTEIVTDEVAAGGAVTLPGLGKFACRER
PARMVRNPATGEQVHKDADRVAKVTIAKALKDVINA
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaaaccaatgacaaaaactcagctcgttgccgcgctggcggaaaagaccgat
agcgacaagacgacagcaaattcgatgctcgccgctctcaccgagatcgtgactgacgaa
gtagcagccggtggcgcagtgacgctgcccggacttggcaaattcgcctgccgtgagcgc
ccggcgcgcatggttcggaaccccgccacgggcgagcaggttcacaaggacgccgaccgc
gttgccaaggtaacgattgccaaggctctgaaagacgtcatcaacgcctga
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