KEGG   Algicella marina: GO499_16425
Entry
GO499_16425       CDS       T08414                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
amaq  Algicella marina
Brite
KEGG Orthology (KO) [BR:amaq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amaq03032]
    GO499_16425
   03036 Chromosome and associated proteins [BR:amaq03036]
    GO499_16425
   03400 DNA repair and recombination proteins [BR:amaq03400]
    GO499_16425
DNA replication proteins [BR:amaq03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GO499_16425
Chromosome and associated proteins [BR:amaq03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GO499_16425
DNA repair and recombination proteins [BR:amaq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GO499_16425
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 SctB2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: QHQ36645
UniProt: A0A6P1T4G8
LinkDB
Position
complement(3348468..3348758)
AA seq 96 aa
MAQKPMTKTQLVAALAEKTDSDKTTANSMLAALTEIVTDEVAAGGAVTLPGLGKFACRER
PARMVRNPATGEQVHKDADRVAKVTIAKALKDVINA
NT seq 291 nt   +upstreamnt  +downstreamnt
atggcccagaaaccaatgacaaaaactcagctcgttgccgcgctggcggaaaagaccgat
agcgacaagacgacagcaaattcgatgctcgccgctctcaccgagatcgtgactgacgaa
gtagcagccggtggcgcagtgacgctgcccggacttggcaaattcgcctgccgtgagcgc
ccggcgcgcatggttcggaaccccgccacgggcgagcaggttcacaaggacgccgaccgc
gttgccaaggtaacgattgccaaggctctgaaagacgtcatcaacgcctga

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